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The map label for this gene is 148358226

Identifier: 148358226

GI number: 148358226

Start: 84229

End: 84513

Strand: Direct

Name: 148358226

Synonym: LPC_0087

Alternate gene names: NA

Gene position: 84229-84513 (Clockwise)

Preceding gene: 148358225

Following gene: 148358227

Centisome position: 2.36

GC content: 36.84

Gene sequence:

>285_bases
ATGATGAAACTTAAAACATTAAAGGCTAAAGCGTTAAAAAATCCTGAAGTAAAAGAAGCATACGATGCTTTGGAATCCGA
ATTTGCATTGATCGATGCGTTACTGACGATGCGTCAAAAAGCTGGATTAACTCAAGAAGAGTTAGCTGAGCGAATGGGGA
CAAAAAAAGGGAATATTTCTCGACTGGAAAAAGGAAATACTAATCCAAGCTGGAATACTTTAGAGAAATATGCACATGCG
TGTGGGTTTGATATTTCAATGGCAGTAAAGAGAATCGCTTCATAA

Upstream 100 bases:

>100_bases
GAAAGCATATTGTGGTTTTGCATGCATTTGTAAAGAAAAGTGCAAAAACTCCAAAACCAGATTTGCAATTAGCTCTCAAA
AGAAAGCGGGAGGTAGAAAA

Downstream 100 bases:

>100_bases
TTTTTGATTCATATTCATAACATTTCTCAAGATTAAATAAATTCCAAACATTCTAGTATGGCTAGATTATTTGGAATATT
TATAAACTCAAATTATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Phage-Like Regulator Protein; Transcriptional Regulator; Transcriptional Regulator CI Family; XRE Family Helix-Turn-Helix Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Bacteriophage Protein; Bacteriophage

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNISRLEKGNTNPSWNTLEKYAHA
CGFDISMAVKRIAS

Sequences:

>Translated_94_residues
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNISRLEKGNTNPSWNTLEKYAHA
CGFDISMAVKRIAS
>Mature_94_residues
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNISRLEKGNTNPSWNTLEKYAHA
CGFDISMAVKRIAS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10488; Mature: 10488

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNIS
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
RLEKGNTNPSWNTLEKYAHACGFDISMAVKRIAS
HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNIS
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
RLEKGNTNPSWNTLEKYAHACGFDISMAVKRIAS
HHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA