Click here to switch to the map view.

The map label for this gene is 148358163

Identifier: 148358163

GI number: 148358163

Start: 29793

End: 30335

Strand: Reverse

Name: 148358163

Synonym: LPC_0024

Alternate gene names: NA

Gene position: 30335-29793 (Counterclockwise)

Preceding gene: 148358164

Following gene: 148358152

Centisome position: 0.85

GC content: 38.12

Gene sequence:

>543_bases
ATGAAATCGTTTATTGAGCAAGCTCAATTCTATGCAACCTACCACCAAAACCCAGCGACACGTTACACACATATGGCAGG
AGTCCCGTTAATCATGCTTTCTATCATGATTTTTCTGGGATTTGTTAAAATAGTTATTCCAGGTGTTTATGCAACCGATC
TTGCTTGTTTGGCTACGCTTGCCGCTCTCATTTATTACTTCCTGTTAAACTGGCAACTTGCCTTGGCATTAACTCCCATT
TTGATCTTTTTGTTATGGCTGGCCAGTTGGTTTAACTATGATGGCCCAACGAAATTCGGACTTTGGGTATTTATTATTAC
TTTTGTTGTAGGCTGGGGATTGCAATTTTACGGTCATTTTATTGAAGGAAAAAAACCTGCCTTTATGGTTAATTTTACCC
AAGCCCTTATTGCGCCTTTGTATTTAACAGCGGAATTGTTCTTTATGGCAGGACTCATGAACTCCCTGAGAGAACAAATT
TACGGGAATGAAGAAGTAAATACTGAAGAAATTAGCAAAACCAAAACAAAATCCAAATCTTAA

Upstream 100 bases:

>100_bases
TGATTTAACGAATAGTTAAGAACTCCTCCTCTCTTTTTGGTACTTCTTTATTTTATGTGCTATGTTTTCTTCATGACCCT
AACTTCAGGATGAAAAGAAA

Downstream 100 bases:

>100_bases
AGAGAGTCGAGCTTCACGCTTATGAAAGGGAAGCTCGGCAAGAGATCTAATAATAAATAACTGAATTATTCAGTTATCCG
CAAAATGTGGCATTACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSFIEQAQFYATYHQNPATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS

Sequences:

>Translated_180_residues
MKSFIEQAQFYATYHQNPATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS
>Mature_180_residues
MKSFIEQAQFYATYHQNPATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQI
YGNEEVNTEEISKTKTKSKS

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20539; Mature: 20539

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFIEQAQFYATYHQNPATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AALIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQIYGNEEVNTEEISKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKSFIEQAQFYATYHQNPATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AALIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMNSLREQIYGNEEVNTEEISKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA