| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is yjeE [C]
Identifier: 148285172
GI number: 148285172
Start: 2116537
End: 2116959
Strand: Direct
Name: yjeE [C]
Synonym: OTBS_2170
Alternate gene names: 148285172
Gene position: 2116537-2116959 (Clockwise)
Preceding gene: 148285171
Following gene: 148285173
Centisome position: 99.51
GC content: 32.39
Gene sequence:
>423_bases ATGGTTGAAATAAAATTAGGAAATCGAAGTGCAACTAAAGCTTTTGCTCAGCACTTAGCTGTAAATTTGAAGCCAGGATC AATAGTTACTTTCAGTGGAGATTTAGGAGCTGGAAAGACTTTTATATGCAGAGAAATTATTCGTACAATATGTGGAATGA ATACTATAGTATCAAGTCCAACTTTTAATGTACTACAAAGATATCAGGCTGATAACTTTGCAATTTATCATTTTGATTTA TATCGTCTAAGAGATAGTAGTGAGATTTATGAGCTTGGCATTGAAGATGCGTGGCAACAAAATGTTTGCTTGATTGAATG GCCAGAACTGATAGAAGCTATAATACCTAGGCCTTACGTTAGTATAAGGATAACAATGAATACTAATTTAGAAAGGATTA TTTCAGTTGTAAATTTACTGTAA
Upstream 100 bases:
>100_bases AGGTATTTCTAAGGGATTAAATAAAATGTGGCGCTATGTTATTACTGATAAAGAATTTCCTTCAAATATTTTCCTACCTT CTTAGAAGTGATATATCGAG
Downstream 100 bases:
>100_bases TGATAGTGCTTTTTTACAAATTGTATCTTTATAAGATATGTTGATTGCCTTAAAAAATAAAAATTTACAGATCTAAAATA AAATCTAGCATTGAAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADNFAIYHFDL YRLRDSSEIYELGIEDAWQQNVCLIEWPELIEAIIPRPYVSIRITMNTNLERIISVVNLL
Sequences:
>Translated_140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADNFAIYHFDL YRLRDSSEIYELGIEDAWQQNVCLIEWPELIEAIIPRPYVSIRITMNTNLERIISVVNLL >Mature_140_residues MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSPTFNVLQRYQADNFAIYHFDL YRLRDSSEIYELGIEDAWQQNVCLIEWPELIEAIIPRPYVSIRITMNTNLERIISVVNLL
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=122, Percent_Identity=36.8852459016393, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15908; Mature: 15908
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSP CEEEEECCCHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCC TFNVLQRYQADNFAIYHFDLYRLRDSSEIYELGIEDAWQQNVCLIEWPELIEAIIPRPYV HHHHHHHHCCCCEEEEEEEEEEECCCCHHEECCCCCHHCCCEEEEECHHHHHHHCCCCEE SIRITMNTNLERIISVVNLL EEEEEECCCHHHHHHHHHCC >Mature Secondary Structure MVEIKLGNRSATKAFAQHLAVNLKPGSIVTFSGDLGAGKTFICREIIRTICGMNTIVSSP CEEEEECCCHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCC TFNVLQRYQADNFAIYHFDLYRLRDSSEIYELGIEDAWQQNVCLIEWPELIEAIIPRPYV HHHHHHHHCCCCEEEEEEEEEEECCCCHHEECCCCCHHCCCEEEEECHHHHHHHCCCCEE SIRITMNTNLERIISVVNLL EEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]