| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148285129
Identifier: 148285129
GI number: 148285129
Start: 2021024
End: 2022367
Strand: Direct
Name: 148285129
Synonym: OTBS_2087
Alternate gene names: NA
Gene position: 2021024-2022367 (Clockwise)
Preceding gene: 148285128
Following gene: 148285132
Centisome position: 95.02
GC content: 31.25
Gene sequence:
>1344_bases ATGTCAAATTTATATCATATACTTCATAAACTACCAGCTATAGAACATGAAGACATGATGGTTGAATATGAAAATTTAGC TCAATCTTTAGTACAATCAGGAAAGCTACGAGTTGATGCTGAACCAAAAATCAATTTTGTTCGTTTATCTGAACCTAGCT TGAATGTTAATATTGCTATTTCAAATGAGGAGCTTAATGATCCTAAGCTTCAGCATCATACTAAAGCAATGCTAGTTAAT ATTTATAAGAAAATAATAGAAAAAGATAAAGTCATTCATAAAGTTAATCAGATAGTTAGTGTTTTACAGAAAAAAATGGC TATGCAGCTTGCAGTAGAACAGGATCTACTACTTAAATTAGCAAGGTTATTTGTACAATCAGCCCATCCAATAGTAATTC ATTGGCTGCTATTAGAACGAGTAGAAGTATTTATATCCTATTCAAACCAGATAGGAGATGTTATGGATATTGCTACCTGG AAATATGCTGGTCAAAATAGTGGTATGCAAAGTATCAATGGAAATAATATAGCAATATATGTTTCATGTGGTGGTAATCC ATTCTTTTTTACTCAACGCTATCAAGAGCAATCTATTTATGGCGATGGTTGGCCAGCGATAGCAAGACTGCAAATCATTG CAGCACAAGAATTGGGGCATTATGCTGATATTTACCGCGATATTAATGCTAATATTGTTGGCCGACATTCAGTTAATTCA TCTTTTACAAAGGCTAAACCTAATGTTTTACATGCAAGGCGTAGCGATTTATCCAGATGCTATAAAATTCTACAAAACCT TGAGTGTGTAGGACTTAATAGCTTAATTACTTATGAAAAATCAGTAAAATTTTATCGTAAAAATAAAGTTAAAGGTATTA AACTATTATGGGCTAGACTGTTAAGTTTTTTCTATAAGCAAAAGCTTTATTTTATGATCAAACAAGAAGATTTTATATTT GTTAAAGTCTATAAAAATGAGCAATATTCTGGCTTAATGTTAAAAGCAATGATTCTTGATATGATCTCAAACTTAGAACC AAAAGCTGAGGTTTATAAAAGAGATGATCCTGATGCTGAGGAAGCTATTGCTTGCGTTGAAGCTTTAGCTAGGGTACCGC AGCAAGTAATAAAATGGGGACATATAACTACAATGTCAATAATGCAAGATCTGTATTATATTTACTATAAGCAGGTAATT CCATCATTAATTGATAGATATCAGTATATTACAGGAAAACCTTATATGCGAAATCTGAATTATGTTAGCCAAACTCTCAA ATATAGAATAAAGAAATTATGGCCATTTTTTAAAAAAACTTCTTTACCTTCTCGTGAAGTTTAA
Upstream 100 bases:
>100_bases TGCTAGAATTTATATCATATATGCTTAGTTATATGAAATTTTGTGGTTATATTTTATAGTAATATTATCTATATATCTAT GCTATCTTTAAAGCAATATT
Downstream 100 bases:
>100_bases AAAGTCTGCATTTTTAACGCCAGTTTAGGATAAGAAAAAGCATGAAAGGCCTAATGTAAAAGGCCTACGAGAGATAATGC ACAATTAAATTATGCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLVN IYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATW KYAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS SFTKAKPNVLHARRSDLSRCYKILQNLECVGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIF VKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVI PSLIDRYQYITGKPYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV
Sequences:
>Translated_447_residues MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLVN IYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATW KYAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS SFTKAKPNVLHARRSDLSRCYKILQNLECVGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIF VKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVI PSLIDRYQYITGKPYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV >Mature_446_residues SNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAISNEELNDPKLQHHTKAMLVNI YKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKLARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWK YAGQNSGMQSINGNNIAIYVSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNSS FTKAKPNVLHARRSDLSRCYKILQNLECVGLNSLITYEKSVKFYRKNKVKGIKLLWARLLSFFYKQKLYFMIKQEDFIFV KVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAEEAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIP SLIDRYQYITGKPYMRNLNYVSQTLKYRIKKLWPFFKKTSLPSREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020183 - ProDom: PD216750 [H]
Pfam domain/function: PF10871 DUF2748 [H]
EC number: NA
Molecular weight: Translated: 52010; Mature: 51879
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAI CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEE SNEELNDPKLQHHTKAMLVNIYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWKYAGQNSGMQSINGNNIAIY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCEEEE VSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS EEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SFTKAKPNVLHARRSDLSRCYKILQNLECVGLNSLITYEKSVKFYRKNKVKGIKLLWARL CHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LSFFYKQKLYFMIKQEDFIFVKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAE HHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIPSLIDRYQYITGKPYMRNLN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YVSQTLKYRIKKLWPFFKKTSLPSREV HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNLYHILHKLPAIEHEDMMVEYENLAQSLVQSGKLRVDAEPKINFVRLSEPSLNVNIAI CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEEEE SNEELNDPKLQHHTKAMLVNIYKKIIEKDKVIHKVNQIVSVLQKKMAMQLAVEQDLLLKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLFVQSAHPIVIHWLLLERVEVFISYSNQIGDVMDIATWKYAGQNSGMQSINGNNIAIY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCEEEE VSCGGNPFFFTQRYQEQSIYGDGWPAIARLQIIAAQELGHYADIYRDINANIVGRHSVNS EEECCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC SFTKAKPNVLHARRSDLSRCYKILQNLECVGLNSLITYEKSVKFYRKNKVKGIKLLWARL CHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH LSFFYKQKLYFMIKQEDFIFVKVYKNEQYSGLMLKAMILDMISNLEPKAEVYKRDDPDAE HHHHHHHHHHEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EAIACVEALARVPQQVIKWGHITTMSIMQDLYYIYYKQVIPSLIDRYQYITGKPYMRNLN HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YVSQTLKYRIKKLWPFFKKTSLPSREV HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]