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The map label for this gene is spoT48 [H]

Identifier: 148285127

GI number: 148285127

Start: 2019298

End: 2019873

Strand: Direct

Name: spoT48 [H]

Synonym: OTBS_2085

Alternate gene names: 148285127

Gene position: 2019298-2019873 (Clockwise)

Preceding gene: 148285115

Following gene: 148285128

Centisome position: 94.93

GC content: 32.12

Gene sequence:

>576_bases
ATGATAGATTTTTATAGTGAGAGCTTAATAAATAAGCTGTTCAGAACCAACGTAAGATTTAACACCAAAATTGATCTTGA
TAAAGTTGAAAGAGCAATAAAATATGCTAAAAAATATCATGGCCAGCAAAAGAGAGATACTGGAGAACTCTACTACACAC
ATCCATTGAAAGTAGCGTACATGGTATCAGACTACAGCTTTGAAACAGATACAATTATTACTGCAATACTACATGATACA
CTTGAAGACACAAAACTAACTAAAGAAAGAATAAGGTACGAATTTGGTGCTAATATTGCAGAACAGGTTTCAGACCTTAC
CAGAGTTAGGGATAATAAGAAAATCAGTGCTATGGAAATGATACAAATATTACGCAGCCAAAATAAAACAGAACTGTTAC
TAATCAAGCTTTTTGATCGATTCCATAATATTACAACTATATTCATCAAACCTCCTCAAAAAAGGCAAGAAATAATATTT
GAAACTCAGCAAGAATTTATAGCTCTTGCTGAATACCTTAAACTACCAGAGATTGGAGAACGCTTAAGTGAATATTGTAA
ACTTCATGCTAGTTAA

Upstream 100 bases:

>100_bases
ATAATTTAATTTGCTTCTTTTCCAGTTTTTATCTGGGATTGGAGTATACAAAAAATTTAAATTATGGTATAATTTATTAA
TAACCATTTAGAGATGGAAA

Downstream 100 bases:

>100_bases
AATGTAGAAATAATTGAGAATGAAGCGATTAAATATATGATATTTAAATCTAAGACTAAGTATACCTTACATAGCGCTAT
TCAAGATGGTGATATTAAAA

Product: spoT-like ppGpp hydrolase

Products: NA

Alternate protein names: Penta-phosphate guanosine-3'-pyrophosphohydrolase; (ppGpp)ase [H]

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIDFYSESLINKLFRTNVRFNTKIDLDKVERAIKYAKKYHGQQKRDTGELYYTHPLKVAYMVSDYSFETDTIITAILHDT
LEDTKLTKERIRYEFGANIAEQVSDLTRVRDNKKISAMEMIQILRSQNKTELLLIKLFDRFHNITTIFIKPPQKRQEIIF
ETQQEFIALAEYLKLPEIGERLSEYCKLHAS

Sequences:

>Translated_191_residues
MIDFYSESLINKLFRTNVRFNTKIDLDKVERAIKYAKKYHGQQKRDTGELYYTHPLKVAYMVSDYSFETDTIITAILHDT
LEDTKLTKERIRYEFGANIAEQVSDLTRVRDNKKISAMEMIQILRSQNKTELLLIKLFDRFHNITTIFIKPPQKRQEIIF
ETQQEFIALAEYLKLPEIGERLSEYCKLHAS
>Mature_191_residues
MIDFYSESLINKLFRTNVRFNTKIDLDKVERAIKYAKKYHGQQKRDTGELYYTHPLKVAYMVSDYSFETDTIITAILHDT
LEDTKLTKERIRYEFGANIAEQVSDLTRVRDNKKISAMEMIQILRSQNKTELLLIKLFDRFHNITTIFIKPPQKRQEIIF
ETQQEFIALAEYLKLPEIGERLSEYCKLHAS

Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the degradation of ppGpp into G

COG id: COG0317

COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1790082, Length=187, Percent_Identity=31.5508021390374, Blast_Score=87, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI25143118, Length=154, Percent_Identity=30.5194805194805, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR012675
- InterPro:   IPR003607
- InterPro:   IPR007685
- InterPro:   IPR004811
- InterPro:   IPR004095
- InterPro:   IPR012676 [H]

Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]

EC number: =3.1.7.2 [H]

Molecular weight: Translated: 22665; Mature: 22665

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFYSESLINKLFRTNVRFNTKIDLDKVERAIKYAKKYHGQQKRDTGELYYTHPLKVAY
CCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEE
MVSDYSFETDTIITAILHDTLEDTKLTKERIRYEFGANIAEQVSDLTRVRDNKKISAMEM
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
IQILRSQNKTELLLIKLFDRFHNITTIFIKPPQKRQEIIFETQQEFIALAEYLKLPEIGE
HHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLSEYCKLHAS
HHHHHHHHCCC
>Mature Secondary Structure
MIDFYSESLINKLFRTNVRFNTKIDLDKVERAIKYAKKYHGQQKRDTGELYYTHPLKVAY
CCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEE
MVSDYSFETDTIITAILHDTLEDTKLTKERIRYEFGANIAEQVSDLTRVRDNKKISAMEM
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
IQILRSQNKTELLLIKLFDRFHNITTIFIKPPQKRQEIIFETQQEFIALAEYLKLPEIGE
HHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RLSEYCKLHAS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]