| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148285038
Identifier: 148285038
GI number: 148285038
Start: 1848681
End: 1849349
Strand: Direct
Name: 148285038
Synonym: OTBS_1917
Alternate gene names: NA
Gene position: 1848681-1849349 (Clockwise)
Preceding gene: 148285034
Following gene: 148285039
Centisome position: 86.91
GC content: 27.35
Gene sequence:
>669_bases ATGAAACCGTGGTTATATGATTTTAATGGATGGAATGTCAAATTATTCTTAATCATCAATCAAATTACCAATAGTAATGA ATGTATCGCTAAAATGTTCTACTATTTATCTAGAATAGTCTATGCTAAAAATTTTACAATATATTATTTATTACTAGCAG TTTATTTATTAATCAAACTTAGAAATTATCATGGTGAAAAACGCGCTTATCAATTTAACATAACTTGTAATTATTTGTTA TATGTAGGAACAGCATACACTATATTTTTACTAGTATACAGCAAATTGAAACGTCTCTTCTCATTTACTAGGCCTTGTTG CTCACTTTCATCATCAGAAATACAAACAGTTATAGATTTTAATACAGAATATGTTAATTGTTTTACTAGTTTCCCTAGTG CTCATACTGGAATCACATTTTTCATCGTGGCATGTTTATGGCATAAACTAAACAGAATAGGTAAATTCGCAGGAGTAGTG CTAGTCATAATGGTTGGTATATCAAGATTGTCATTGGCAATGCATTATCCGTCTGATATTATATATTCTTGTATAATTAC AGCAATGATTTTATATACTACTAAGGCTATATTAGAAATTCAAATAATAAAATCATTTACTCAAGCTATTCAAAATAAAA TATATATGCTAGCTTGCAAAATAAAGTGA
Upstream 100 bases:
>100_bases TTTTACAAATTTACCTTAAAATTATATTGATTAGTACTTATTTAACATATAATATACCAACCAATAATTTATATAAACTC AAATACAATAAGGAAAAATA
Downstream 100 bases:
>100_bases TGTTATGAAAGTTATAGCAGCTTTTTTTATTAAGGATTATAAATAATCATCCTTAATTTATGCTGCTGTGTTTGTCATTG ACTTCAGTAGCATAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIVYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRLFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVV LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK
Sequences:
>Translated_222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIVYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRLFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVV LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK >Mature_222_residues MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIVYAKNFTIYYLLLAVYLLIKLRNYHGEKRAYQFNITCNYLL YVGTAYTIFLLVYSKLKRLFSFTRPCCSLSSSEIQTVIDFNTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVV LVIMVGISRLSLAMHYPSDIIYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25863; Mature: 25863
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIVYAKNFTIYYLLLAVYLLIKL CCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RNYHGEKRAYQFNITCNYLLYVGTAYTIFLLVYSKLKRLFSFTRPCCSLSSSEIQTVIDF HHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEC NTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVVLVIMVGISRLSLAMHYPSDI CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MKPWLYDFNGWNVKLFLIINQITNSNECIAKMFYYLSRIVYAKNFTIYYLLLAVYLLIKL CCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RNYHGEKRAYQFNITCNYLLYVGTAYTIFLLVYSKLKRLFSFTRPCCSLSSSEIQTVIDF HHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEC NTEYVNCFTSFPSAHTGITFFIVACLWHKLNRIGKFAGVVLVIMVGISRLSLAMHYPSDI CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IYSCIITAMILYTTKAILEIQIIKSFTQAIQNKIYMLACKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA