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The map label for this gene is traF

Identifier: 148285018

GI number: 148285018

Start: 1812179

End: 1812883

Strand: Direct

Name: traF

Synonym: OTBS_1875

Alternate gene names: NA

Gene position: 1812179-1812883 (Clockwise)

Preceding gene: 148285017

Following gene: 148285021

Centisome position: 85.2

GC content: 34.47

Gene sequence:

>705_bases
ATGAGCAGATTATTAATGTTTATGATATTAATTAGTCATTTATCCACTGTTGATGCTTCACCAACAAGATTTTTATGGTA
CAATGATAAACATGGTCATGAGCTTGATGACTCTGCTGCTAATTCTAAGTTGATGAGTGTGGCTCATGACCAGAGAATCG
AGGAATTAAAGAAGCAATTTAATCGAGCTCAGCGTATAGCGCTGGATAATCCAACGCTCGAAAATGTGATTACAGCTCAA
AGATTGCAGAAGCAAATCATGGAGAAGGCTCATAAGTTTGCTACTATGTGGCAACTAGCTACTCTACTTGATTACCAACT
GATTAATGCTAATGAGCCTGCTAATAGCTTACATAGAAAGCTATATCAAGAAAAATCAGAGCAAAAAAATGATTTCAAAC
TCAAAAACATTGCTAAAAACTGGGGATTGATTTTGCAAGTTAAACAAGATTGCTTGCTCTGTAAGGCCTTTATGCCTATT
GTTCAGTGCTTTGCTAATAAATATGCATTTCAGTTGCTAGCTGTCAGTAAGAATAATGAGTTGCTTAATAAACTAAATCC
TAAGCATATTGTACCTGTATTATATTCAGTAGCTAGCGATGGTAAAAAAATATATGCAGTAGCTAGAGGCATAATCTCTG
AAGATAAAATTATCGACAATATTCTAGCAATCGATAGATATTATCATAAGTTGGAGACTACATGA

Upstream 100 bases:

>100_bases
TATTTGGTGATATACTCACTAAGGCTCAAAGCAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGT
ATGCAACAAAGTTAGTCTAA

Downstream 100 bases:

>100_bases
GCACCAAAATCAGAGTTTATGCCATTACAATGCTATTATTGCTACAAGCTCCAGTATCACTAGCTTGGAATATCGAAAAC
GTATTTCAAGGAATGAGTGT

Product: conjugative pilus assembly protein

Products: NA

Alternate protein names: Conjugative Transfer Protein TraF; Conjugative Pilus Assembly Protein; TPR Repeat-Containing Protein; Conjugal Transfer Protein TraF

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSRLLMFMILISHLSTVDASPTRFLWYNDKHGHELDDSAANSKLMSVAHDQRIEELKKQFNRAQRIALDNPTLENVITAQ
RLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQKNDFKLKNIAKNWGLILQVKQDCLLCKAFMPI
VQCFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYSVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETT

Sequences:

>Translated_234_residues
MSRLLMFMILISHLSTVDASPTRFLWYNDKHGHELDDSAANSKLMSVAHDQRIEELKKQFNRAQRIALDNPTLENVITAQ
RLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQKNDFKLKNIAKNWGLILQVKQDCLLCKAFMPI
VQCFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYSVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETT
>Mature_233_residues
SRLLMFMILISHLSTVDASPTRFLWYNDKHGHELDDSAANSKLMSVAHDQRIEELKKQFNRAQRIALDNPTLENVITAQR
LQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQKNDFKLKNIAKNWGLILQVKQDCLLCKAFMPIV
QCFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYSVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27056; Mature: 26925

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLMFMILISHLSTVDASPTRFLWYNDKHGHELDDSAANSKLMSVAHDQRIEELKKQF
CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NRAQRIALDNPTLENVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LYQEKSEQKNDFKLKNIAKNWGLILQVKQDCLLCKAFMPIVQCFANKYAFQLLAVSKNNE
HHHHHHCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
LLNKLNPKHIVPVLYSVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETT
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRLLMFMILISHLSTVDASPTRFLWYNDKHGHELDDSAANSKLMSVAHDQRIEELKKQF
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NRAQRIALDNPTLENVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LYQEKSEQKNDFKLKNIAKNWGLILQVKQDCLLCKAFMPIVQCFANKYAFQLLAVSKNNE
HHHHHHCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHH
LLNKLNPKHIVPVLYSVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETT
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA