Click here to switch to the map view.

The map label for this gene is gcvT

Identifier: 148284975

GI number: 148284975

Start: 1733207

End: 1734073

Strand: Direct

Name: gcvT

Synonym: OTBS_1793

Alternate gene names: NA

Gene position: 1733207-1734073 (Clockwise)

Preceding gene: 148284972

Following gene: 148284976

Centisome position: 81.48

GC content: 27.8

Gene sequence:

>867_bases
ATGCATAGTTATCATTTATTAAATAACAGAGCAATTTTAGAATTATCTGGTTGCGATGCATCTAATTTTTTATTAAGAAT
TACCACAAATGTTATACCTGCAGCAAATGGGGAAGCTAAGTATTCTATGATTTTAAGTCCTCAAGGTAGATTTTTATTTG
ATTTTTTCCTTATCAATAATCATAACACTTTTTTTATTGATTGTTTAGCGAGTATCAAAAATGCTCTTCTATCAAAATTG
CATATGTTCAAGCTTAGATCAAAAGTGCAAATCAATGATGTAAGTGACTTCTATGATGTAATATATAGCCAATTTTATAT
AAATGATAGTAACTTACATCATCTTAATCTTAATACTGCAAAATTAGTAACTCAATATCGAGATCCTAGATTTAATCAAA
TGGGATTTAGATTGTTAACTGAAAAACTACATTCTTGTAACTTAGTTAATTCAAATACTGATGTATATTTAGTTGATAAA
TATAAGTTTGCAATACCTGATGGAGAAATTGATATACCATCTAACAAAGCCATTCCTCCTGAGTATGGTGCTGATAGATT
AAATGCTATAAGTTATTCTAAAGGATGTTATATAGGACAAGAATTAATATCTAGAATTAAATCTCAAGGAGTAGTACGAA
AAAAAATATATCATGCTACTAGCGATGAAAATTTACTTAATGTTGCACCTCAAACTCCAATTATGCATAATAGCAATATT
ATAGGTTACTGGTGCTCTAGTTACTATACACAAGGTATAGCATTAATTAGAGAAAGTAGCGATCAAAATAATATTTTTAC
TAAACAAGAAATTACAGTAGATAGCGCTAAAATAAAACTTAGCATTCCTCAATGGCAAATAACATAA

Upstream 100 bases:

>100_bases
TTTGTCAGTTCTGACTATAATAGTTAATGTACTTTTTAGTATAAAAAAATTTATAGCATAATTGATTCTTAATATTTGAA
ATATCAAATCACTTAAACTT

Downstream 100 bases:

>100_bases
AATTAATTTTATATAGGGTGATACAAGTTATTTATGACCTAAGTTCGATATAAGATATATCTGAAGAATAAGAATTTCCA
TAATAGTTTAACAACAGTTT

Product: gcvT-like aminomethyltransferase

Products: NA

Alternate protein names: Aminomethyl Transferase Family Protein; Glycine Cleavage T-Protein; Aminomethyltransferase; Glycine Cleavage System T Protein Aminomethyltransferase; Aminomethyltransferase Protein; Glycine Cleavage T-Protein Barrel; Aminomethyltransferase Family Protein; Aminomethyltransferase Related GcvT; Glycine Cleavage T-Protein C-Terminal Barrel; GcvT-Like Aminomethyltransferase Protein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MHSYHLLNNRAILELSGCDASNFLLRITTNVIPAANGEAKYSMILSPQGRFLFDFFLINNHNTFFIDCLASIKNALLSKL
HMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDK
YKFAIPDGEIDIPSNKAIPPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNI
IGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQWQIT

Sequences:

>Translated_288_residues
MHSYHLLNNRAILELSGCDASNFLLRITTNVIPAANGEAKYSMILSPQGRFLFDFFLINNHNTFFIDCLASIKNALLSKL
HMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDK
YKFAIPDGEIDIPSNKAIPPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNI
IGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQWQIT
>Mature_288_residues
MHSYHLLNNRAILELSGCDASNFLLRITTNVIPAANGEAKYSMILSPQGRFLFDFFLINNHNTFFIDCLASIKNALLSKL
HMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTAKLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDK
YKFAIPDGEIDIPSNKAIPPEYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNI
IGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQWQIT

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=308, Percent_Identity=28.2467532467532, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71985951, Length=283, Percent_Identity=26.8551236749117, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24645123, Length=298, Percent_Identity=26.1744966442953, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32905; Mature: 32905

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSYHLLNNRAILELSGCDASNFLLRITTNVIPAANGEAKYSMILSPQGRFLFDFFLINN
CCCEEEECCCEEEEEECCCCCCEEEEEEECCEECCCCCCEEEEEECCCCCEEEEEEEEEC
HNTFFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTA
CCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHEEECCCCEEEEECCHH
KLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPP
HHHHHHCCCCCHHHHHHHHHHHHHHCEEECCCCCEEEEEEEEEECCCCCEECCCCCCCCC
EYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNI
CCCCCHHCEEECCCCCCHHHHHHHHHHHCCHHHHHHEECCCCCCEEEECCCCCEEECCCE
IGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQWQIT
EEEEHHHHHHCCEEEEECCCCCCCCEEEEEEEEECEEEEEECCCEEEC
>Mature Secondary Structure
MHSYHLLNNRAILELSGCDASNFLLRITTNVIPAANGEAKYSMILSPQGRFLFDFFLINN
CCCEEEECCCEEEEEECCCCCCEEEEEEECCEECCCCCCEEEEEECCCCCEEEEEEEEEC
HNTFFIDCLASIKNALLSKLHMFKLRSKVQINDVSDFYDVIYSQFYINDSNLHHLNLNTA
CCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHEEECCCCEEEEECCHH
KLVTQYRDPRFNQMGFRLLTEKLHSCNLVNSNTDVYLVDKYKFAIPDGEIDIPSNKAIPP
HHHHHHCCCCCHHHHHHHHHHHHHHCEEECCCCCEEEEEEEEEECCCCCEECCCCCCCCC
EYGADRLNAISYSKGCYIGQELISRIKSQGVVRKKIYHATSDENLLNVAPQTPIMHNSNI
CCCCCHHCEEECCCCCCHHHHHHHHHHHCCHHHHHHEECCCCCCEEEECCCCCEEECCCE
IGYWCSSYYTQGIALIRESSDQNNIFTKQEITVDSAKIKLSIPQWQIT
EEEEHHHHHHCCEEEEECCCCCCCCEEEEEEEEECEEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA