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The map label for this gene is traD_Ti

Identifier: 148284947

GI number: 148284947

Start: 1692287

End: 1692742

Strand: Direct

Name: traD_Ti

Synonym: OTBS_1742

Alternate gene names: NA

Gene position: 1692287-1692742 (Clockwise)

Preceding gene: 148284945

Following gene: 148284948

Centisome position: 79.56

GC content: 34.87

Gene sequence:

>456_bases
ATGGCAAATCTTATGCAGCAAAAAATTACTCTCCAACAAAAAAAGGCTAAGCTAATCATGGATGAGGTTAACCTTAAAAT
TAAAGAACGTAAAATGCGTACTCGACGTCTTATCGAAATGGGTGGATTAGTTGCTAAGGCTAAGCTTGATCACTTATCAG
CAAATACTTTATTTGGTGCAATTGTTTCACTAAAAGAAACTTTAACACAACATCCAAATGTTCAGAATCATTGGACTACA
ATCGGTAAAGATATTTTTGATAAAGAACAGCAAAATAAAGCTGCCGTGATTTTAAAATTTTCCTCTGAACCAGACGAAAA
CACTAAGCTCCACATTCGCCTTCATGGCTTAAAATGGAATAGCTTTCACCAAGAATGGTGCGGCCATGTTAAGGATATTG
AAGCCTTAAAGAATGGCCTTCTTAATGTTCAATATAATCTAAAATTGGTATCCTGA

Upstream 100 bases:

>100_bases
AATTATTTGATGTTGGTTTGGCAGGTGCGGTTTTTTTCTTTACTGGAATTTTATTTTGATATATTCTTGCCTGATTTTTT
TATCTTTCTGAATTACTAAC

Downstream 100 bases:

>100_bases
ATTGAAAATATTTAAGCAACAAAAAAGTTATTGCTAATTAGCTAGTATAATTTATAAACTTATAATATAAACTTACTTAA
CAATAGGGTGATTTATGTAT

Product: conjugative transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TraD; Conjugative Transfer Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MANLMQQKITLQQKKAKLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQNHWTT
IGKDIFDKEQQNKAAVILKFSSEPDENTKLHIRLHGLKWNSFHQEWCGHVKDIEALKNGLLNVQYNLKLVS

Sequences:

>Translated_151_residues
MANLMQQKITLQQKKAKLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQNHWTT
IGKDIFDKEQQNKAAVILKFSSEPDENTKLHIRLHGLKWNSFHQEWCGHVKDIEALKNGLLNVQYNLKLVS
>Mature_150_residues
ANLMQQKITLQQKKAKLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGAIVSLKETLTQHPNVQNHWTTI
GKDIFDKEQQNKAAVILKFSSEPDENTKLHIRLHGLKWNSFHQEWCGHVKDIEALKNGLLNVQYNLKLVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17406; Mature: 17274

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLMQQKITLQQKKAKLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
IVSLKETLTQHPNVQNHWTTIGKDIFDKEQQNKAAVILKFSSEPDENTKLHIRLHGLKWN
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCC
SFHQEWCGHVKDIEALKNGLLNVQYNLKLVS
CHHHHHCCCHHHHHHHHCCCEEEEEEEEEEC
>Mature Secondary Structure 
ANLMQQKITLQQKKAKLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSANTLFGA
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
IVSLKETLTQHPNVQNHWTTIGKDIFDKEQQNKAAVILKFSSEPDENTKLHIRLHGLKWN
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCC
SFHQEWCGHVKDIEALKNGLLNVQYNLKLVS
CHHHHHCCCHHHHHHHHCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA