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The map label for this gene is yhbC

Identifier: 148284845

GI number: 148284845

Start: 1530871

End: 1531353

Strand: Direct

Name: yhbC

Synonym: OTBS_1566

Alternate gene names: 148284845

Gene position: 1530871-1531353 (Clockwise)

Preceding gene: 148284843

Following gene: 148284846

Centisome position: 71.97

GC content: 26.29

Gene sequence:

>483_bases
ATGTTAAACGATAAAATAAAAGAGCTAATTACTCCTACTGCAAAAACCTTAGGATATAAGGTTATAAATGTAAGCTTTAT
TGTAAAGCCAGCTATATTAAAAATAGTTATTGATCGTTTTGATGAAAAAAAAGTTAACGTTTTAGATTGTCAAGTGTTTA
GTAAAGCTATTTCAGCAGTTTTAGATGTTGAAAACATAATACCAGGTAAGTACTTTTTAGAAGTTGAATCTGCTGGTATT
GAGCGAAGTCTAATGGATTTAGAAGATTTTATAAAATTTTTAGGATATACAATACAAGTAAAGCTAGTTGCAGCTATTAA
TGAAAACAAAAAATATATAGGTGTAATTTCTAATATTAAGGGACAAGAAATCACACTAAATTTGCAAAATGATAGTACTA
TTGCTATAGATTATGATAATATAAAGGTTGCAAAGATAGTTTTTACAGATGAAATGTTTAGACAAATCACCAAAAATTAT
TAG

Upstream 100 bases:

>100_bases
AGAAGCTATTGCTTTGAATTTATATTAGTTGATAATTGCATATATATTTTAATAGCTATTCTAATGAGTAGTATGTCAAT
AACAAATACTTTACATAAGA

Downstream 100 bases:

>100_bases
CTCAGGAGATATAATATGGTTAATCCTATCAATGCTGAAGTGTTAAGAGTTGTTAATTATATTGCTAGAGATAAGGATAT
TTCACAAGATGCTTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNDKIKELITPTAKTLGYKVINVSFIVKPAILKIVIDRFDEKKVNVLDCQVFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY

Sequences:

>Translated_160_residues
MLNDKIKELITPTAKTLGYKVINVSFIVKPAILKIVIDRFDEKKVNVLDCQVFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
>Mature_160_residues
MLNDKIKELITPTAKTLGYKVINVSFIVKPAILKIVIDRFDEKKVNVLDCQVFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=148, Percent_Identity=35.8108108108108, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ORITB (A5CEN4)

Other databases:

- EMBL:   AM494475
- RefSeq:   YP_001248935.1
- STRING:   A5CEN4
- GeneID:   5217945
- GenomeReviews:   AM494475_GR
- KEGG:   ots:OTBS_1566
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   TVQIMAD
- ProtClustDB:   CLSK2325836
- BioCyc:   OTSU357244:OTBS_1566-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18153; Mature: 18153

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDKIKELITPTAKTLGYKVINVSFIVKPAILKIVIDRFDEKKVNVLDCQVFSKAISAV
CCCHHHHHHHCCCHHHHCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCC
GQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
CCEEEEEECCCCEEEEEECCEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MLNDKIKELITPTAKTLGYKVINVSFIVKPAILKIVIDRFDEKKVNVLDCQVFSKAISAV
CCCHHHHHHHCCCHHHHCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCC
GQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
CCEEEEEECCCCEEEEEECCEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA