Click here to switch to the map view.

The map label for this gene is traB [C]

Identifier: 148284818

GI number: 148284818

Start: 1473391

End: 1473816

Strand: Direct

Name: traB [C]

Synonym: OTBS_1510

Alternate gene names: 148284818

Gene position: 1473391-1473816 (Clockwise)

Preceding gene: 148284817

Following gene: 148284819

Centisome position: 69.27

GC content: 35.92

Gene sequence:

>426_bases
GTGGTAGATAAATCGTCTAACATAGCAAGCATGGCTGCATTAAATGGAGTATTTAGCAATATTGCTAAGTTTCTACAAGC
TAAGGCTATTAAACCTGATATGCTACCAACTTTAAACCTAGTAGCTGGAGGTCATCAACAACAAGAGTTTCAGATTGGAG
ATGCGCTTCAGTCTGGAGCTTACTCTGGAGCTAGTAATGCTTTTGATAAGCTAGCTGATTTTGCTATAAAACAAGCTGAT
TCTATGAGCCCAGTCGTTCTTATTGCGTCAGGTAGAGTCATCGATGTTGTATTTAAAAAAGGTTTTGACTTACGTGAGCA
CAAGAAGAAGCCACATAATTTAACTTATTCACAATCAACTAACAATGAAAAAGTTAATTTGCATAATAAATTCGACCAAT
CACAAAAGTTAGAGGAGCATTTATAA

Upstream 100 bases:

>100_bases
AAACTGCTTCAAAGTAAAATTTCATTATGGAGATATTATTGAAAACAAGGCGGAAGGCTGGTTGATAGGTGAAGATGGAC
GTTCTGGAATTAAAGGAATC

Downstream 100 bases:

>100_bases
TGAAGTTTTTATTATTGCTATTGGGCTGTATGAGCCTAACAAGCTTCTTTTTCGAAAGTAATTTTGATTGTAAAATTCCT
AAAGGGCAAAAATGTAAGTC

Product: conjugative pilus assembly protein

Products: NA

Alternate protein names: F Pilus Assembly Protein TraB; Conjugative Pilus Assembly Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNAFDKLADFAIKQAD
SMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL

Sequences:

>Translated_141_residues
MVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNAFDKLADFAIKQAD
SMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL
>Mature_141_residues
MVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGAYSGASNAFDKLADFAIKQAD
SMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQSTNNEKVNLHNKFDQSQKLEEHL

Specific function: Involved In F Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15445; Mature: 15445

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCC
YSGASNAFDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQST
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCCHHHHCCCCCCCEECCCC
NNEKVNLHNKFDQSQKLEEHL
CCCEEEECCHHCHHHHHHHCC
>Mature Secondary Structure
MVDKSSNIASMAALNGVFSNIAKFLQAKAIKPDMLPTLNLVAGGHQQQEFQIGDALQSGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCC
YSGASNAFDKLADFAIKQADSMSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSQST
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCCHHHHCCCCCCCEECCCC
NNEKVNLHNKFDQSQKLEEHL
CCCEEEECCHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA