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The map label for this gene is tnD [H]

Identifier: 148284715

GI number: 148284715

Start: 1270919

End: 1271839

Strand: Direct

Name: tnD [H]

Synonym: OTBS_1304

Alternate gene names: 148284715

Gene position: 1270919-1271839 (Clockwise)

Preceding gene: 148284713

Following gene: 148284716

Centisome position: 59.75

GC content: 32.14

Gene sequence:

>921_bases
ATGAATAGTATAATTGTAGGAATTGATATTTCTAAAGAGACATTTGATGCCGCTGTGTTAATTAATCATAAAGTTCAAAC
AAGAAAATTTAATAATAATTCTGAAGGATTTAACAAATTAGTAACATGGTTAAAAAGCAGAGAAACTGGACATGTTTGTA
TGGAAGCAACATGTATCTACTGGAAAAGCTTAGCGAAATATCTGTACGATTATGGCTATAAAGTGAGTGTAGTAAATCCT
GCTCGTATTAAAGGTTTTGCAATGAGTAAACTTAGTCGTACAAAAACAGATAAAGCAGACAGTGTATTAATAGCAGATTT
TTGCAAAGCAATGAAACAGGAAGCATGGTATCCACAGCCGCATTATATTCAAGAACTACAGCAGCTGGTTAATCGCCTGA
ATGTTTTAATTAAGCATAAAACACAAGAAACAAATAGATTAGAAGGAGCTTCTAAAGCAATTGCTAATAATATTCAAATG
CACATTGAATTTCTTGAAACACAAATTAAAGAAATTGAACAACTAATCAATGACCATATTAAAAATAACAAAGATCTTCA
CAATAAAGCTATGTTACTTGAATCAATACCAGGTATAGGAGCAAAAACACAAGCTATAGTTCTGGCTTTTTTAGCAGATA
TTGAGAAATTTAGTTCTGCTAAACAAGTTGTAGCTTTTGTAGGTCTTAATCCTAAGCATCGTCAATCTGGTAGTTCTGTG
CGTAGCGCTAGTAGAATCTCTAGAACTGGTAATTCAGATCTACGTAAGTCTTTTTATATGCCTGCTATGTCTGCCTTAAG
ACATAATTGTATTATCAAGCATTTTTCTCAACGTTTATCTAACACTGGTAAACCCAAAATGCTTATCCTTACTGCTGCTA
TGCGTAAGTTATTACATAGAACATCTTATAATCAAAAGTAG

Upstream 100 bases:

>100_bases
TAACTATCTTTTTTAACTAAAAACCGGACGGTATTCTTAGGCAAAAAAGCCTGTATTTACAAGGTTGGTTTTGAGATATT
TAACATAAAATTTGGTGATT

Downstream 100 bases:

>100_bases
GTTCCTTTCTTTTGTATCTCTAAACTGGATTATTTTTCTTCTTTGGTTGGTACTTTTATTTTATTTAATGCTGCTTGTGT
AAATTTAAATACTGTTACTG

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNSIIVGIDISKETFDAAVLINHKVQTRKFNNNSEGFNKLVTWLKSRETGHVCMEATCIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKQEAWYPQPHYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM
HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RSASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHRTSYNQK

Sequences:

>Translated_306_residues
MNSIIVGIDISKETFDAAVLINHKVQTRKFNNNSEGFNKLVTWLKSRETGHVCMEATCIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKQEAWYPQPHYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM
HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RSASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHRTSYNQK
>Mature_306_residues
MNSIIVGIDISKETFDAAVLINHKVQTRKFNNNSEGFNKLVTWLKSRETGHVCMEATCIYWKSLAKYLYDYGYKVSVVNP
ARIKGFAMSKLSRTKTDKADSVLIADFCKAMKQEAWYPQPHYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQM
HIEFLETQIKEIEQLINDHIKNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV
RSASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHRTSYNQK

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 34796; Mature: 34796

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIIVGIDISKETFDAAVLINHKVQTRKFNNNSEGFNKLVTWLKSRETGHVCMEATCIY
CCCEEEEEECCHHHHHHHEEEECCHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
WKSLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIADFCKAMKQEAWYPQP
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
HYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQMHIEFLETQIKEIEQLINDHI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHH
RSASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
TSYNQK
HCCCCC
>Mature Secondary Structure
MNSIIVGIDISKETFDAAVLINHKVQTRKFNNNSEGFNKLVTWLKSRETGHVCMEATCIY
CCCEEEEEECCHHHHHHHEEEECCHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
WKSLAKYLYDYGYKVSVVNPARIKGFAMSKLSRTKTDKADSVLIADFCKAMKQEAWYPQP
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
HYIQELQQLVNRLNVLIKHKTQETNRLEGASKAIANNIQMHIEFLETQIKEIEQLINDHI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNNKDLHNKAMLLESIPGIGAKTQAIVLAFLADIEKFSSAKQVVAFVGLNPKHRQSGSSV
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHH
RSASRISRTGNSDLRKSFYMPAMSALRHNCIIKHFSQRLSNTGKPKMLILTAAMRKLLHR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
TSYNQK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]