| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is hkp27
Identifier: 148284653
GI number: 148284653
Start: 1158845
End: 1159591
Strand: Direct
Name: hkp27
Synonym: OTBS_1181
Alternate gene names: NA
Gene position: 1158845-1159591 (Clockwise)
Preceding gene: 148284647
Following gene: 148284654
Centisome position: 54.48
GC content: 26.77
Gene sequence:
>747_bases ATGCCTATAGAATACGAAGGTCAAAATAAAATCAATAAATTAACTGAAAAATTATCTACAGATGGAATTAATAGCACAAC AATAAAACAGGTAGATGCAGAATTGCAAAAACTATACTGTCAGCTGGAAAAATCTGGGCAAGTAAGCATAAATTTCATAG ATTGGATACAATATTTTAGGCGAATCGTAAATAACTATGATAAAAAAAAGATAAATATAATAGCTTCTCTGAATGGAATA ATTTTTTTATTTAGACAATACATAGCATCAACAAATATAAGGATTGAAACATTTAACATAGAATCACTAATAAATAATAC TGTTATCAGAATGAGGAAAAATTTTGAAAATGAGAATATAAATCTAAATGTTCAAAATGATATAAAGACAGTTCTGATTG GAGATAGTTTTCGAATAAAAGCAGTAATAAGCCAGTTAATTGGTAGTGCTATTATAAATAGTAGTAAGAATAGCAAAATT ACTATTAACATCAATCAGTATTCAGAAATATTACAATTTACAGTACAAAACATAGGACTAAGTCCTTCTAAAGAAAAATT AGAAAGAATAAATGCTGAACTAGAGAATTTGAATTTGGTAACATATCAAGAACTAGGAGAAGGATTAGCATTTATTAAAC ATCTTACACATCAGCTAAAAGGAAGACTAAGAGCAAAAGAGGAAAAGAATTACATAACTTTTGCATTTGAAGTGCCAATA ACTAGTTTTAACTCTTCTTTAGGATAA
Upstream 100 bases:
>100_bases GATTTAGATAATATTCTGATAGAGATTAAAACTTAAACCGCAAAATTTTCTTTTTAATCTCTAGGAAGCAATTTAACAAC TTAAATAGCAGGGTAATTCT
Downstream 100 bases:
>100_bases TGCTATGAAAGCAAAAAAGAAAACAATTAACCAATGGATGGTACAAATACCTCCAATACCAATTACGCTAGTGAATAGAG AAAGGGAGAATATCGATGAA
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPIEYEGQNKINKLTEKLSTDGINSTTIKQVDAELQKLYCQLEKSGQVSINFIDWIQYFRRIVNNYDKKKINIIASLNGI IFLFRQYIASTNIRIETFNIESLINNTVIRMRKNFENENINLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQLKGRLRAKEEKNYITFAFEVPI TSFNSSLG
Sequences:
>Translated_248_residues MPIEYEGQNKINKLTEKLSTDGINSTTIKQVDAELQKLYCQLEKSGQVSINFIDWIQYFRRIVNNYDKKKINIIASLNGI IFLFRQYIASTNIRIETFNIESLINNTVIRMRKNFENENINLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQLKGRLRAKEEKNYITFAFEVPI TSFNSSLG >Mature_247_residues PIEYEGQNKINKLTEKLSTDGINSTTIKQVDAELQKLYCQLEKSGQVSINFIDWIQYFRRIVNNYDKKKINIIASLNGII FLFRQYIASTNIRIETFNIESLINNTVIRMRKNFENENINLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKIT ININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQLKGRLRAKEEKNYITFAFEVPIT SFNSSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28470; Mature: 28339
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEYEGQNKINKLTEKLSTDGINSTTIKQVDAELQKLYCQLEKSGQVSINFIDWIQYFR CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH RIVNNYDKKKINIIASLNGIIFLFRQYIASTNIRIETFNIESLINNTVIRMRKNFENENI HHHCCCCCHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCE NLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQLKGRLRAKEEKNYITFAFEVPI CCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECE TSFNSSLG ECCCCCCC >Mature Secondary Structure PIEYEGQNKINKLTEKLSTDGINSTTIKQVDAELQKLYCQLEKSGQVSINFIDWIQYFR CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH RIVNNYDKKKINIIASLNGIIFLFRQYIASTNIRIETFNIESLINNTVIRMRKNFENENI HHHCCCCCHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCE NLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQLKGRLRAKEEKNYITFAFEVPI CCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECE TSFNSSLG ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA