| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is hkp23
Identifier: 148284596
GI number: 148284596
Start: 1055468
End: 1056211
Strand: Direct
Name: hkp23
Synonym: OTBS_1072
Alternate gene names: NA
Gene position: 1055468-1056211 (Clockwise)
Preceding gene: 148284595
Following gene: 148284597
Centisome position: 49.62
GC content: 28.23
Gene sequence:
>744_bases ATGCCTATTGAAGACGAAGGTCAAAATAAAATCAATAAATTAACTGAAAAATTATCCACAGAGGGAATTAATAGCACAAC AATAAAACAGATAGATGCTGAAATGCAAAAACTATACTGCCAGCTAGAGGAATCTGAGGAAGTAAGCATAAATTGCATAG AGTGGATACAATATTTTAGGCTAATAGTAAATAACTACGACAGAAAAAAAGTAAATATAATAGCTTCTCTAAATGGAATG ATTTTTTTATTTAGACAATACATAGCATCAACGAATGTAAGGATTGAAACATTTAACATAGAATTGCTAATAAATAATAC CGTTATCAGAATGAGGGAACATTTTGAAGATGAGAATATAAAGCTAAATGTTCAAAATGACATAAAGACAATTCTGATTG GAGATAGTTTTCGAATAAAAGCAGTAATAAGTCAGTTAATTGGTAGTGCTATTATAAATAGTAGTAAGAATAGCAAGATT ACTATTAACATCAATCAGTATTCAGAAATATTACAATTTACAGTACAAAACATAGGACTAAGCCCTTCTAAAGAAAAATT AGAAAGAATAAATGCTGAACTAGAGAATTTGAATTTGGTAACATATCAAGAACTAGGAGAAGGATTAGCATTTATTAAAC ATCTTACAGATCAGCTAAAAGGAAGACTAAGAGCAAAAGAGGAAAATAATTACATAACTTTTTCATTTGATGTACCAATA ACTAGTTTTAACTCTTCTTTATGA
Upstream 100 bases:
>100_bases GATTTAGATGATATTCTGATAGAGATTAAAACTTAAACCGCAAAATTTTCTTTTTAATCTCTAGGAAGCAATTTAACAAC TTAAATAGCAGGAGAATTCT
Downstream 100 bases:
>100_bases GAATGCTATGAAAGAAAAGAATAAAACAATTAACCAATGGATAGTACAGATACCTCCAATACCAGTTATGTTGCTGAATG GAGAGAGGGAGAATATCGAT
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDAEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMREHFEDENIKLNVQNDIKTILIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTDQLKGRLRAKEENNYITFSFDVPI TSFNSSL
Sequences:
>Translated_247_residues MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDAEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMREHFEDENIKLNVQNDIKTILIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTDQLKGRLRAKEENNYITFSFDVPI TSFNSSL >Mature_246_residues PIEDEGQNKINKLTEKLSTEGINSTTIKQIDAEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGMI FLFRQYIASTNVRIETFNIELLINNTVIRMREHFEDENIKLNVQNDIKTILIGDSFRIKAVISQLIGSAIINSSKNSKIT ININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTDQLKGRLRAKEENNYITFSFDVPIT SFNSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28475; Mature: 28344
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDAEMQKLYCQLEESEEVSINCIEWIQYFR CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMREHFEDENI HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCE KLNVQNDIKTILIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTDQLKGRLRAKEENNYITFSFDVPI CCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCE TSFNSSL ECCCCCC >Mature Secondary Structure PIEDEGQNKINKLTEKLSTEGINSTTIKQIDAEMQKLYCQLEESEEVSINCIEWIQYFR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMREHFEDENI HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHCCCCCE KLNVQNDIKTILIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTDQLKGRLRAKEENNYITFSFDVPI CCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCE TSFNSSL ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA