| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284336
Identifier: 148284336
GI number: 148284336
Start: 548086
End: 549699
Strand: Direct
Name: 148284336
Synonym: OTBS_0575
Alternate gene names: NA
Gene position: 548086-549699 (Clockwise)
Preceding gene: 148284333
Following gene: 148284337
Centisome position: 25.77
GC content: 24.6
Gene sequence:
>1614_bases ATGAATATATTGCTACTAAAATTTAAACAATTGATATCTCGCGTTATATTTAAATCCTCTATAATAATATATTTAGGAAA GATTGGGGCTTCTATTGTAGTAATATCTAACAATAGCATCATTGAAGACATGTTTTTAACATATGATACTGATGGAGTAC ATAAATTCAATAAGTTTCAAGAATTACTTAGCAGATACGCTGGTTATAGTGTATCTATACTAATTGATTTGCCAGAAATA AAGTTACAGCAAGAATTTTTGATTGCTATAGAAACTGGAATAAAAAAAAATCCAGTTGATAACTATATTAAGCAACATTT TGGCTCAAACAGTATAATTGGCTATTATATACTTAATATTACTTATAATGGCAGTGAACTATGGCAAGCACAAATTGCTT CAATAGAATTAAATCACATTATCAAAACATTTGTTGATGAAATTATTGTACGTTCAGAAATAACATTTTCTGGATTATTT TTGTGTCCTTTAGAAATTCCTAAAATTATACATACTTTATTAAAGTCAAATATTAAAACTATATGTAATATTATGGAACA TATAGCTAACTCCACAGTGTTTCAAATAACAAAAACACAATATATATCCCTTCAACAAACTAATTATCTTACTACTAAAA CAAAGCTGTTCAAAAAAGCTTATGAAAATAATATAATTCTGATAGTATGTATTACTAAAGCAAATGGTATTACATTTTGT TTATTCAATCAGCAGAATATTATTTTTAGTAACACAATACCATATTGCGCTACTAAAAGCCCTGAGTATATATATGGTAT ACTAAAGTATGAATCTAATGAGATATTATCATCATTTAAGTTATATATTCTAGAATCAAATAAAAAAGTAATAATTCACT ACTTAGTTGATGAACAAATTCAAAAATTTATAGAAAACGATTCTAATAGTTACACTGATACTATCATTACAACTATTCCA AATACTTATTCTGACCAATTAATATCTCAGTTATTTAATTACTGTTCTATACGCTGTGCTTATAACAAATATCTAGATGA ATTCAATAAGTTAAGAAAATTTAATTCAGTATTTTTACGATTTGTATTGATAGCAGTAATAATATTATGCTCTATCCTAA TTAGATTATGGTATAAAGTATTTATTCAAAAAAAAGCTCTAGCTAATTTTTATGAACAAATTAATACAATTAGTGCAAAT CAACGCAAAGCTGAACTTGAGTTAGCAGCTTCTTATAATATATCATCAGATATTATTGAAAGTTATTACCTTGATAAGCA CATTAATTCTAAGCATTATCCTATAGCTTTAGATGCATTAAAGTTATTATTGCATAACCCAAATATAGAAATACAAAAAA TAACATATACACTTAATGATCAACTACTTAGAAATGAGTTAATCATGTCTATTGAAGTAAAATTCTATTATTTAAATAAT ACTACTGTAAACCAAGAAGATTGTTTAATTAAATTAGAAAAATATAATGCTAATATTATCGAGATGTTCAAAAATTATCA AGTTAATTTAACATCGTTAGGACAAGAAATATGTAGCAATTCTAATGTATCAAGAAAATTGCTAACCATGTCTATTAGTA GGATAGTTAATTAA
Upstream 100 bases:
>100_bases ATTATTTTTTAGGCTAGTTGCTATAAGTTCGAAAAACATAGTATAATGTACAATATATACTGTTCTAATAGCTTATGCTA CATTTTTATAGTTGCGATTA
Downstream 100 bases:
>100_bases TATGATAAACCAACGAATTCTTTATCTCAAAAACCTAATATGTTTCAAGATAGTGCTATATGGTATAATAATATTATTAT GCCATATTTATAGTTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN
Sequences:
>Translated_537_residues MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN >Mature_537_residues MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62248; Mature: 62248
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQ CCEEHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHEEEECCCCCHHHHHHH ELLSRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNI HHHHHHCCCEEEEEEECCCCHHCHHEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEE TYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH ICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC HHHHHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEE LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQI EECCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHEEEEEEECCCEEEEEEHHHHHH QKFIENDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLR HHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH FVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISANQRKAELELAASYNISSDIIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH SYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHEEEEEEEEEEEECC TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN CCCCCCCCEEEEECCCCHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQ CCEEHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHEEEECCCCCHHHHHHH ELLSRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNI HHHHHHCCCEEEEEEECCCCHHCHHEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEE TYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKT EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH ICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC HHHHHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEE LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQI EECCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHEEEEEEECCCEEEEEEHHHHHH QKFIENDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLR HHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH FVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISANQRKAELELAASYNISSDIIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH SYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHEEEEEEEEEEEECC TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN CCCCCCCCEEEEECCCCHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]