Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

Click here to switch to the map view.

The map label for this gene is 148284336

Identifier: 148284336

GI number: 148284336

Start: 548086

End: 549699

Strand: Direct

Name: 148284336

Synonym: OTBS_0575

Alternate gene names: NA

Gene position: 548086-549699 (Clockwise)

Preceding gene: 148284333

Following gene: 148284337

Centisome position: 25.77

GC content: 24.6

Gene sequence:

>1614_bases
ATGAATATATTGCTACTAAAATTTAAACAATTGATATCTCGCGTTATATTTAAATCCTCTATAATAATATATTTAGGAAA
GATTGGGGCTTCTATTGTAGTAATATCTAACAATAGCATCATTGAAGACATGTTTTTAACATATGATACTGATGGAGTAC
ATAAATTCAATAAGTTTCAAGAATTACTTAGCAGATACGCTGGTTATAGTGTATCTATACTAATTGATTTGCCAGAAATA
AAGTTACAGCAAGAATTTTTGATTGCTATAGAAACTGGAATAAAAAAAAATCCAGTTGATAACTATATTAAGCAACATTT
TGGCTCAAACAGTATAATTGGCTATTATATACTTAATATTACTTATAATGGCAGTGAACTATGGCAAGCACAAATTGCTT
CAATAGAATTAAATCACATTATCAAAACATTTGTTGATGAAATTATTGTACGTTCAGAAATAACATTTTCTGGATTATTT
TTGTGTCCTTTAGAAATTCCTAAAATTATACATACTTTATTAAAGTCAAATATTAAAACTATATGTAATATTATGGAACA
TATAGCTAACTCCACAGTGTTTCAAATAACAAAAACACAATATATATCCCTTCAACAAACTAATTATCTTACTACTAAAA
CAAAGCTGTTCAAAAAAGCTTATGAAAATAATATAATTCTGATAGTATGTATTACTAAAGCAAATGGTATTACATTTTGT
TTATTCAATCAGCAGAATATTATTTTTAGTAACACAATACCATATTGCGCTACTAAAAGCCCTGAGTATATATATGGTAT
ACTAAAGTATGAATCTAATGAGATATTATCATCATTTAAGTTATATATTCTAGAATCAAATAAAAAAGTAATAATTCACT
ACTTAGTTGATGAACAAATTCAAAAATTTATAGAAAACGATTCTAATAGTTACACTGATACTATCATTACAACTATTCCA
AATACTTATTCTGACCAATTAATATCTCAGTTATTTAATTACTGTTCTATACGCTGTGCTTATAACAAATATCTAGATGA
ATTCAATAAGTTAAGAAAATTTAATTCAGTATTTTTACGATTTGTATTGATAGCAGTAATAATATTATGCTCTATCCTAA
TTAGATTATGGTATAAAGTATTTATTCAAAAAAAAGCTCTAGCTAATTTTTATGAACAAATTAATACAATTAGTGCAAAT
CAACGCAAAGCTGAACTTGAGTTAGCAGCTTCTTATAATATATCATCAGATATTATTGAAAGTTATTACCTTGATAAGCA
CATTAATTCTAAGCATTATCCTATAGCTTTAGATGCATTAAAGTTATTATTGCATAACCCAAATATAGAAATACAAAAAA
TAACATATACACTTAATGATCAACTACTTAGAAATGAGTTAATCATGTCTATTGAAGTAAAATTCTATTATTTAAATAAT
ACTACTGTAAACCAAGAAGATTGTTTAATTAAATTAGAAAAATATAATGCTAATATTATCGAGATGTTCAAAAATTATCA
AGTTAATTTAACATCGTTAGGACAAGAAATATGTAGCAATTCTAATGTATCAAGAAAATTGCTAACCATGTCTATTAGTA
GGATAGTTAATTAA

Upstream 100 bases:

>100_bases
ATTATTTTTTAGGCTAGTTGCTATAAGTTCGAAAAACATAGTATAATGTACAATATATACTGTTCTAATAGCTTATGCTA
CATTTTTATAGTTGCGATTA

Downstream 100 bases:

>100_bases
TATGATAAACCAACGAATTCTTTATCTCAAAAACCTAATATGTTTCAAGATAGTGCTATATGGTATAATAATATTATTAT
GCCATATTTATAGTTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI
KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF
LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC
LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP
NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN
QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN
TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN

Sequences:

>Translated_537_residues
MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI
KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF
LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC
LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP
NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN
QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN
TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN
>Mature_537_residues
MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEI
KLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLF
LCPLEIPKIIHTLLKSNIKTICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC
LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQIQKFIENDSNSYTDTIITTIP
NTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISAN
QRKAELELAASYNISSDIIESYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN
TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62248; Mature: 62248

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQ
CCEEHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHEEEECCCCCHHHHHHH
ELLSRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNI
HHHHHHCCCEEEEEEECCCCHHCHHEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEE
TYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
ICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC
HHHHHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEE
LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQI
EECCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHEEEEEEECCCEEEEEEHHHHHH
QKFIENDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLR
HHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
FVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISANQRKAELELAASYNISSDIIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH
SYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHEEEEEEEEEEEECC
TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN
CCCCCCCCEEEEECCCCHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQ
CCEEHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHEEEECCCCCHHHHHHH
ELLSRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNI
HHHHHHCCCEEEEEEECCCCHHCHHEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEE
TYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
ICNIMEHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFC
HHHHHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEE
LFNQQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILESNKKVIIHYLVDEQI
EECCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHEEEEEEECCCEEEEEEHHHHHH
QKFIENDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLR
HHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
FVLIAVIILCSILIRLWYKVFIQKKALANFYEQINTISANQRKAELELAASYNISSDIIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH
SYYLDKHINSKHYPIALDALKLLLHNPNIEIQKITYTLNDQLLRNELIMSIEVKFYYLNN
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHEEEEEEEEEEEECC
TTVNQEDCLIKLEKYNANIIEMFKNYQVNLTSLGQEICSNSNVSRKLLTMSISRIVN
CCCCCCCCEEEEECCCCHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]