| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
Click here to switch to the map view.
The map label for this gene is 148284327
Identifier: 148284327
GI number: 148284327
Start: 534801
End: 534980
Strand: Direct
Name: 148284327
Synonym: OTBS_0563
Alternate gene names: NA
Gene position: 534801-534980 (Clockwise)
Preceding gene: 148284326
Following gene: 148284330
Centisome position: 25.14
GC content: 27.78
Gene sequence:
>180_bases ATGGTTAAATACTGTTATGTAAATTGCTTAGGCTGTAAGATCATTAAAGCATTGCCACAGCATACAGTAAAGAGGTTTAT ATTAAAAATAATATTCAAGAGGGATATAAACGTAGCCAAAAGCTGTCATGTAAGCATTTTAGACTTTTTATTATTATACG ATATTTATTACCTAAAGTAA
Upstream 100 bases:
>100_bases ATTTGGTAAATTTTATGAATCTATTATTGCCTTTTTCTATGCTCAAACCTTATTGTAAATGACTATATAGATATTGATGA ACAGAAATGAAATAATGTAA
Downstream 100 bases:
>100_bases AAGTATATCGTGCGTTATGGTAATATGAGTAGTGTAAATGTTTGCTAGATAATATTCCAACGAATAAACCTATTCTAAAG AAATAGTTAAAAAAATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MVKYCYVNCLGCKIIKALPQHTVKRFILKIIFKRDINVAKSCHVSILDFLLLYDIYYLK
Sequences:
>Translated_59_residues MVKYCYVNCLGCKIIKALPQHTVKRFILKIIFKRDINVAKSCHVSILDFLLLYDIYYLK >Mature_59_residues MVKYCYVNCLGCKIIKALPQHTVKRFILKIIFKRDINVAKSCHVSILDFLLLYDIYYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7011; Mature: 7011
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKYCYVNCLGCKIIKALPQHTVKRFILKIIFKRDINVAKSCHVSILDFLLLYDIYYLK CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVKYCYVNCLGCKIIKALPQHTVKRFILKIIFKRDINVAKSCHVSILDFLLLYDIYYLK CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA