Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is rhp4

Identifier: 148284306

GI number: 148284306

Start: 496482

End: 497054

Strand: Direct

Name: rhp4

Synonym: OTBS_0520

Alternate gene names: NA

Gene position: 496482-497054 (Clockwise)

Preceding gene: 148284305

Following gene: 148284315

Centisome position: 23.34

GC content: 30.37

Gene sequence:

>573_bases
ATGGTGGTTATGCGAATCAGTGATACTAGTGATTCTATCCAAATCTTGCCTAACAGCAATACTTTATCTGAGTTAACAAA
ATTAGTTTACAATTGTATATTTAACCATAAAGGTTATAATATTTTGCTCTTGCTTGGATGGGATAACAGCACATATCGAG
GCATTCAAGATAAAATTGTGCAGCTTCGTAATACTGAAACAGAAGCAATTATGCTACTTACTAAAGACGATCTTCCCACA
TGCTTAGAATATTATTGTATGGAGCAAGGTAAACTAAATGTATTATATACACAAGTAGATTTTGCTTTTAATACCCTAAG
ATTAATAGTAGAAGAGTATTATGATTTATCTATACGGTTCCAACATTACAAATCTAACCTAACTATTGTATACAATAGTC
ACAGTGAAAATTTACAGAAACAATTAGATGATTTTTTTACTCAACAATGCATGAATCACAATGAAAGTAGCAAATGCATC
CATCACAGTGAAAGTAGCATTAGTGTTTTAGATATTGAGCAATTTAGAGATTTTGTAGGTGATATATTATTAATTGATGA
TCCAGAACGATAA

Upstream 100 bases:

>100_bases
GCTTGTGTCTTAGTTTTTTAATACTTATACAACAAACACAGCTTGATAATTCAGCTAATGTAATTTATAAATCATGAGTG
TAATGCAATTTTAAATATAT

Downstream 100 bases:

>100_bases
TCTATGTATGCCAAGCAGCTATACTCCATTGTGCAAGTAGAAATATATGTAATGCTATGTATGCTAGTTAGAAAAAGCTT
GTATTCTAACTAGCATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT
CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI
HHSESSISVLDIEQFRDFVGDILLIDDPER

Sequences:

>Translated_190_residues
MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT
CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI
HHSESSISVLDIEQFRDFVGDILLIDDPER
>Mature_190_residues
MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT
CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI
HHSESSISVLDIEQFRDFVGDILLIDDPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22252; Mature: 22252

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIV
CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
QLRNTETEAIMLLTKDDLPTCLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRF
HHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCEEEE
QHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIEQFRDFVG
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHHHHC
DILLIDDPER
CEEEEECCCC
>Mature Secondary Structure
MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIV
CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
QLRNTETEAIMLLTKDDLPTCLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRF
HHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCEEEE
QHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIEQFRDFVG
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHHHHC
DILLIDDPER
CEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA