| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp4
Identifier: 148284306
GI number: 148284306
Start: 496482
End: 497054
Strand: Direct
Name: rhp4
Synonym: OTBS_0520
Alternate gene names: NA
Gene position: 496482-497054 (Clockwise)
Preceding gene: 148284305
Following gene: 148284315
Centisome position: 23.34
GC content: 30.37
Gene sequence:
>573_bases ATGGTGGTTATGCGAATCAGTGATACTAGTGATTCTATCCAAATCTTGCCTAACAGCAATACTTTATCTGAGTTAACAAA ATTAGTTTACAATTGTATATTTAACCATAAAGGTTATAATATTTTGCTCTTGCTTGGATGGGATAACAGCACATATCGAG GCATTCAAGATAAAATTGTGCAGCTTCGTAATACTGAAACAGAAGCAATTATGCTACTTACTAAAGACGATCTTCCCACA TGCTTAGAATATTATTGTATGGAGCAAGGTAAACTAAATGTATTATATACACAAGTAGATTTTGCTTTTAATACCCTAAG ATTAATAGTAGAAGAGTATTATGATTTATCTATACGGTTCCAACATTACAAATCTAACCTAACTATTGTATACAATAGTC ACAGTGAAAATTTACAGAAACAATTAGATGATTTTTTTACTCAACAATGCATGAATCACAATGAAAGTAGCAAATGCATC CATCACAGTGAAAGTAGCATTAGTGTTTTAGATATTGAGCAATTTAGAGATTTTGTAGGTGATATATTATTAATTGATGA TCCAGAACGATAA
Upstream 100 bases:
>100_bases GCTTGTGTCTTAGTTTTTTAATACTTATACAACAAACACAGCTTGATAATTCAGCTAATGTAATTTATAAATCATGAGTG TAATGCAATTTTAAATATAT
Downstream 100 bases:
>100_bases TCTATGTATGCCAAGCAGCTATACTCCATTGTGCAAGTAGAAATATATGTAATGCTATGTATGCTAGTTAGAAAAAGCTT GTATTCTAACTAGCATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI HHSESSISVLDIEQFRDFVGDILLIDDPER
Sequences:
>Translated_190_residues MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI HHSESSISVLDIEQFRDFVGDILLIDDPER >Mature_190_residues MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIVQLRNTETEAIMLLTKDDLPT CLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRFQHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCI HHSESSISVLDIEQFRDFVGDILLIDDPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22252
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIV CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH QLRNTETEAIMLLTKDDLPTCLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRF HHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCEEEE QHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIEQFRDFVG EEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHHHHC DILLIDDPER CEEEEECCCC >Mature Secondary Structure MVVMRISDTSDSIQILPNSNTLSELTKLVYNCIFNHKGYNILLLLGWDNSTYRGIQDKIV CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH QLRNTETEAIMLLTKDDLPTCLEYYCMEQGKLNVLYTQVDFAFNTLRLIVEEYYDLSIRF HHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCEEEE QHYKSNLTIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIEQFRDFVG EEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEHHHHHHHHC DILLIDDPER CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA