Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is tnE

Identifier: 148284284

GI number: 148284284

Start: 461876

End: 462826

Strand: Direct

Name: tnE

Synonym: OTBS_0484

Alternate gene names: NA

Gene position: 461876-462826 (Clockwise)

Preceding gene: 148284283

Following gene: 148284285

Centisome position: 21.71

GC content: 30.7

Gene sequence:

>951_bases
ATGCATTTATCAAGATTTTTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT
ACTAATACATTTTCTGAACGATATATTATTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGTACGATAT
TAGACGCTGATATAGCGTCCAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGAGCGCAATATATAATA
GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCGCAGTATTATGCAGCAAAAGCATATGGTAGGCAACCAAA
TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAACA
AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAGGACTTTTCATTTACCTTT
ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAGTGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA
TGCAAAAGAAACAACATTAGATGGATATCATAAAATAATAGGTGAAGATTTAATAATCAAAAGAGCGTATGAGGCATTAG
ATCAGTTTAATTGGAGCGAAGACGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTAGAA
GATTATAAACTCGAACGCGCTAAAGCTGAAGGTATAAAGCTCGGTGAGGCTAAAGGCATAAAGCTCGGTGAGGCTAAAGG
TAAAGCTGAAGGTAAAGCTGAAGGTAAAGCTGAAGCAAAAAAAGATTTTGCAATAAAATTATTGAAATCTGAATTATCAG
TTGAGACAATTGCTGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGCGTAAAATAA

Upstream 100 bases:

>100_bases
GTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTGTTGTATAATTTAAAAAGA
ATAGAAAATATGAAAAATAT

Downstream 100 bases:

>100_bases
TAAGAAATATACAACATACAAAATTTTACCTTTAATGTGTTGTATGCTATTTCTATTAAATCATATAGATGCCTTATATC
ACACTACAAGTTCTATACTA

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Sequences:

>Translated_316_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
>Mature_316_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36577; Mature: 36577

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELSDITEK
HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEY
HHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDLSIQEVLNLKNSVK
HCCCHHHHHHHHHCCC
>Mature Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELSDITEK
HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEY
HHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TDLSIQEVLNLKNSVK
HCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA