| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tnE
Identifier: 148284284
GI number: 148284284
Start: 461876
End: 462826
Strand: Direct
Name: tnE
Synonym: OTBS_0484
Alternate gene names: NA
Gene position: 461876-462826 (Clockwise)
Preceding gene: 148284283
Following gene: 148284285
Centisome position: 21.71
GC content: 30.7
Gene sequence:
>951_bases ATGCATTTATCAAGATTTTTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT ACTAATACATTTTCTGAACGATATATTATTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGTACGATAT TAGACGCTGATATAGCGTCCAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGAGCGCAATATATAATA GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCGCAGTATTATGCAGCAAAAGCATATGGTAGGCAACCAAA TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAACA AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAGGACTTTTCATTTACCTTT ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAGTGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA TGCAAAAGAAACAACATTAGATGGATATCATAAAATAATAGGTGAAGATTTAATAATCAAAAGAGCGTATGAGGCATTAG ATCAGTTTAATTGGAGCGAAGACGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTAGAA GATTATAAACTCGAACGCGCTAAAGCTGAAGGTATAAAGCTCGGTGAGGCTAAAGGCATAAAGCTCGGTGAGGCTAAAGG TAAAGCTGAAGGTAAAGCTGAAGGTAAAGCTGAAGCAAAAAAAGATTTTGCAATAAAATTATTGAAATCTGAATTATCAG TTGAGACAATTGCTGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGCGTAAAATAA
Upstream 100 bases:
>100_bases GTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTGTTGTATAATTTAAAAAGA ATAGAAAATATGAAAAATAT
Downstream 100 bases:
>100_bases TAAGAAATATACAACATACAAAATTTTACCTTTAATGTGTTGTATGCTATTTCTATTAAATCATATAGATGCCTTATATC ACACTACAAGTTCTATACTA
Product: transposase and inactivated derivative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Sequences:
>Translated_316_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK >Mature_316_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELSDITEKWCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36577; Mature: 36577
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELSDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEY HHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TDLSIQEVLNLKNSVK HCCCHHHHHHHHHCCC >Mature Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELSDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYHKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGIKLGEAKGIKLGEAKGKAEGKAEGKAEAKKDFAIKLLKSELSVETIAEY HHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TDLSIQEVLNLKNSVK HCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA