| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tchE
Identifier: 148284171
GI number: 148284171
Start: 315145
End: 315306
Strand: Direct
Name: tchE
Synonym: OTBS_0318
Alternate gene names: NA
Gene position: 315145-315306 (Clockwise)
Preceding gene: 148284170
Following gene: 148284172
Centisome position: 14.82
GC content: 33.33
Gene sequence:
>162_bases ATGAAAAGTTGGAAATTACAGCAATTAGAAAAAGATCTAGTAAAAATATTCAATCATACGCTTATAAGTGGTGAAATACA GGAGATAGTCAATCTAGTAGTAGCGATAGTAAAAGTAGTGGAACTAGTGCTAGTATTGGTTGTGGCGCTTTTTGTGCTAT AG
Upstream 100 bases:
>100_bases ATAAGCACCCCATGAAAACAATATAACATATACTTGAAGCATATGTTGTAAATAGTATAACTCAATATACTAGTCAATTC AACTTAAAAGAAGGTTTTAT
Downstream 100 bases:
>100_bases GTGTAGTTGAAGGAGCACACAAATATAATAATGAACAAGGTAACTCAGTAAATCAGCAACAATCACATAGTAAGACATTA TCAAAAATTCAAAGTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MKSWKLQQLEKDLVKIFNHTLISGEIQEIVNLVVAIVKVVELVLVLVVALFVL
Sequences:
>Translated_53_residues MKSWKLQQLEKDLVKIFNHTLISGEIQEIVNLVVAIVKVVELVLVLVVALFVL >Mature_53_residues MKSWKLQQLEKDLVKIFNHTLISGEIQEIVNLVVAIVKVVELVLVLVVALFVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6014; Mature: 6014
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSWKLQQLEKDLVKIFNHTLISGEIQEIVNLVVAIVKVVELVLVLVVALFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKSWKLQQLEKDLVKIFNHTLISGEIQEIVNLVVAIVKVVELVLVLVVALFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA