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The map label for this gene is abcZ [H]

Identifier: 148284146

GI number: 148284146

Start: 259688

End: 261493

Strand: Direct

Name: abcZ [H]

Synonym: OTBS_0269

Alternate gene names: 148284146

Gene position: 259688-261493 (Clockwise)

Preceding gene: 148284141

Following gene: 148284149

Centisome position: 12.21

GC content: 28.63

Gene sequence:

>1806_bases
ATGAAACTATTACCAATATACTATATCAAGTATGGAGAACTATCTTTCGCTGACCAAAAGATTTTTGATAATTTAAATAT
TTATTTATACCCTGGTGACAAAATTTGTCTAATTGGTAAAAACGGATCTGGTAAATCAAGTTTAATGAAAATAATTAACT
CAGATTATCAATTAAATAAAGGTGAAATATTTCAGCATTCTGCAACTAAAATTGCTTACCTGCAACAAAATGTTGCATGC
AACCTATCGCTTAAAGTATATGACTTCATTACACAATCTATACCTAATAAAGAAAATTACTATCAGGCAGAAATTTTTAT
TGAAAAATTACAAATCAACGCTAATAAAACTTTACGCAAACTTTCCGGAGGTCAATTACGCAGAGTTCAACTAGCGAAAG
TTCTAGCTTCGCATGCTGAAATATTATTGCTAGATGAACCAACTAATCATCTTGATATACAAGCAATTGAATGGTTAGAA
AGTTATATAAAATCATATAAAGGAAGTATAATATGTATTAGCCATGATAGAGCATTTTTAACAGCAATCAGCAATAAGGT
TTGGTGGTTAGATAGATGCATTTTACATCAATCAAATAAAGGATTTCAATTTTTTGAACAATGGCAAGCTCAAATTATTG
ATCAAGAAGAATCTAATTTAATAAAATTAAATAAAAAAATTAATACTGAGCAACTTTGGCTGCATCAAGGAATTTCTGCT
AGACGTAAGCGAAATCAACGCAGATTATCAAATTTAAAAACATTACGAGAGCAATTGAGATTTAGTTCACAAAGATTAGC
TAAAGCATCTCAGAAGGTTCAATTTTATCATAGTAATAATGAAAGTAATAAAGCTAGGTTTATTATTAGAGCGGAAAATG
TATGTTTTAAATATAATGACCAATTTGTCATTAAAAACTTTAATATTAATATAATTAAAGGTAATAAAATTGGAATAATT
GGCCCTAATGGTACTGGGAAATCTACTTTATTAAAACTATTTACTAAAAGTATTAAACCTAGTTCTGGTTTGATAGAACA
TGGCACTACTTTAGAAATAACTTATTTTGACCAGAATAAAAGCTCTTTAAATCCTAATTATACATTACAGCAAACACTTT
GCCCTACTGGAGGAGATCAAATTTTTTTGTCTGACAAAACTATACATGCAGGAGCATATCTTAAAAGTTTCATGTTCGAT
CCAAAGCTATTATCTACGAAAGTTAGCACCTTATCTGGAGGAGAAGCTACTCGTTTATTATTAGCTAAGGCATTAATTAA
ACCTGGCAACCTATTGATACTTGATGAGCCTACAAATGATTTAGATATTGACACTATAGAAATATTGCTAGATATATTGT
CAGATTATTTTGGCACACTAATTGTTGTTAGCCACGATCGTGATTTTTTGAACAGATTAGTTACCAACACATTAGTATTT
GAAGGAAATGGTAATATTATTAACGTGATTGGAGGATATCAGGATTATATAGAACATTACTCTAAGTTAAACCAGCATAT
TACTAATCCTAAGATAGCAAAAAATAACAAAACAGTAAAACATCTAACTCCTAAACTTTCTACAAAACTATCTTATAAAT
TCCAGAGAATGCTAGATAGTATCCCTAAAGAAATAACTCAATTAGAAACTCAAGTTGAAGATTTAGAGAAAAAATTAGCT
GATCCTAACCTTTATCAAAATAACCAAGATAAATTTTTGCTATTTTCTAAGGAACTTGAAACATCAAAACTTAGAATAGA
AGAATTATTTAATACATGGCAAAAAATTGAAAACCGAAATATATAA

Upstream 100 bases:

>100_bases
GCAAATATTCATATTATTTTTTTAATGATATTTGTTGTATAATCAGGCTGCATTAATATTAATTGGCACTTTAAAGTAAA
CTAACAATCTAAATATTTCA

Downstream 100 bases:

>100_bases
CGCCAGAACGTAATAAGGAAAAGTTATGCATAAGGTATAATCACAAAGGTCTCAAAAAGTACAATATTGCTTAATGCAAT
AATGTAGTAACTTTTTAAAA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MKLLPIYYIKYGELSFADQKIFDNLNIYLYPGDKICLIGKNGSGKSSLMKIINSDYQLNKGEIFQHSATKIAYLQQNVAC
NLSLKVYDFITQSIPNKENYYQAEIFIEKLQINANKTLRKLSGGQLRRVQLAKVLASHAEILLLDEPTNHLDIQAIEWLE
SYIKSYKGSIICISHDRAFLTAISNKVWWLDRCILHQSNKGFQFFEQWQAQIIDQEESNLIKLNKKINTEQLWLHQGISA
RRKRNQRRLSNLKTLREQLRFSSQRLAKASQKVQFYHSNNESNKARFIIRAENVCFKYNDQFVIKNFNINIIKGNKIGII
GPNGTGKSTLLKLFTKSIKPSSGLIEHGTTLEITYFDQNKSSLNPNYTLQQTLCPTGGDQIFLSDKTIHAGAYLKSFMFD
PKLLSTKVSTLSGGEATRLLLAKALIKPGNLLILDEPTNDLDIDTIEILLDILSDYFGTLIVVSHDRDFLNRLVTNTLVF
EGNGNIINVIGGYQDYIEHYSKLNQHITNPKIAKNNKTVKHLTPKLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLA
DPNLYQNNQDKFLLFSKELETSKLRIEELFNTWQKIENRNI

Sequences:

>Translated_601_residues
MKLLPIYYIKYGELSFADQKIFDNLNIYLYPGDKICLIGKNGSGKSSLMKIINSDYQLNKGEIFQHSATKIAYLQQNVAC
NLSLKVYDFITQSIPNKENYYQAEIFIEKLQINANKTLRKLSGGQLRRVQLAKVLASHAEILLLDEPTNHLDIQAIEWLE
SYIKSYKGSIICISHDRAFLTAISNKVWWLDRCILHQSNKGFQFFEQWQAQIIDQEESNLIKLNKKINTEQLWLHQGISA
RRKRNQRRLSNLKTLREQLRFSSQRLAKASQKVQFYHSNNESNKARFIIRAENVCFKYNDQFVIKNFNINIIKGNKIGII
GPNGTGKSTLLKLFTKSIKPSSGLIEHGTTLEITYFDQNKSSLNPNYTLQQTLCPTGGDQIFLSDKTIHAGAYLKSFMFD
PKLLSTKVSTLSGGEATRLLLAKALIKPGNLLILDEPTNDLDIDTIEILLDILSDYFGTLIVVSHDRDFLNRLVTNTLVF
EGNGNIINVIGGYQDYIEHYSKLNQHITNPKIAKNNKTVKHLTPKLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLA
DPNLYQNNQDKFLLFSKELETSKLRIEELFNTWQKIENRNI
>Mature_601_residues
MKLLPIYYIKYGELSFADQKIFDNLNIYLYPGDKICLIGKNGSGKSSLMKIINSDYQLNKGEIFQHSATKIAYLQQNVAC
NLSLKVYDFITQSIPNKENYYQAEIFIEKLQINANKTLRKLSGGQLRRVQLAKVLASHAEILLLDEPTNHLDIQAIEWLE
SYIKSYKGSIICISHDRAFLTAISNKVWWLDRCILHQSNKGFQFFEQWQAQIIDQEESNLIKLNKKINTEQLWLHQGISA
RRKRNQRRLSNLKTLREQLRFSSQRLAKASQKVQFYHSNNESNKARFIIRAENVCFKYNDQFVIKNFNINIIKGNKIGII
GPNGTGKSTLLKLFTKSIKPSSGLIEHGTTLEITYFDQNKSSLNPNYTLQQTLCPTGGDQIFLSDKTIHAGAYLKSFMFD
PKLLSTKVSTLSGGEATRLLLAKALIKPGNLLILDEPTNDLDIDTIEILLDILSDYFGTLIVVSHDRDFLNRLVTNTLVF
EGNGNIINVIGGYQDYIEHYSKLNQHITNPKIAKNNKTVKHLTPKLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLA
DPNLYQNNQDKFLLFSKELETSKLRIEELFNTWQKIENRNI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=26.1770244821092, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI10947135, Length=535, Percent_Identity=26.7289719626168, Blast_Score=152, Evalue=1e-36,
Organism=Homo sapiens, GI69354671, Length=535, Percent_Identity=26.7289719626168, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI10947137, Length=568, Percent_Identity=25.7042253521127, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI27881506, Length=543, Percent_Identity=25.414364640884, Blast_Score=139, Evalue=9e-33,
Organism=Escherichia coli, GI1787182, Length=626, Percent_Identity=34.5047923322684, Blast_Score=394, Evalue=1e-110,
Organism=Escherichia coli, GI2367384, Length=564, Percent_Identity=29.7872340425532, Blast_Score=249, Evalue=4e-67,
Organism=Escherichia coli, GI1789751, Length=641, Percent_Identity=26.5210608424337, Blast_Score=216, Evalue=4e-57,
Organism=Escherichia coli, GI1787041, Length=525, Percent_Identity=26.2857142857143, Blast_Score=178, Evalue=8e-46,
Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=28.4210526315789, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1790190, Length=476, Percent_Identity=20.1680672268908, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=26.7281105990783, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1789672, Length=213, Percent_Identity=26.2910798122066, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1788225, Length=207, Percent_Identity=24.1545893719807, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789891, Length=247, Percent_Identity=26.7206477732794, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=24.6305418719212, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787112, Length=246, Percent_Identity=28.8617886178862, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788472, Length=186, Percent_Identity=29.0322580645161, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=24.7368421052632, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=27.8048780487805, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1786319, Length=176, Percent_Identity=28.4090909090909, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=541, Percent_Identity=26.8022181146026, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=26.605504587156, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=24.4821092278719, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17569145, Length=288, Percent_Identity=26.3888888888889, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=408, Percent_Identity=26.2254901960784, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320874, Length=497, Percent_Identity=24.1448692152917, Blast_Score=136, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6325030, Length=358, Percent_Identity=25.1396648044693, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=355, Percent_Identity=23.3802816901408, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323278, Length=350, Percent_Identity=23.1428571428571, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=26.8518518518519, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24666836, Length=548, Percent_Identity=26.4598540145985, Blast_Score=168, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24642252, Length=557, Percent_Identity=26.3913824057451, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI18859989, Length=557, Percent_Identity=26.3913824057451, Blast_Score=151, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 69119; Mature: 69119

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLPIYYIKYGELSFADQKIFDNLNIYLYPGDKICLIGKNGSGKSSLMKIINSDYQLNK
CCCEEEEEEEECCCCCCHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCC
GEIFQHSATKIAYLQQNVACNLSLKVYDFITQSIPNKENYYQAEIFIEKLQINANKTLRK
CCEECCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHH
LSGGQLRRVQLAKVLASHAEILLLDEPTNHLDIQAIEWLESYIKSYKGSIICISHDRAFL
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEE
TAISNKVWWLDRCILHQSNKGFQFFEQWQAQIIDQEESNLIKLNKKINTEQLWLHQGISA
HHHCCCHHEEHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHH
RRKRNQRRLSNLKTLREQLRFSSQRLAKASQKVQFYHSNNESNKARFIIRAENVCFKYND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCEEEEECC
QFVIKNFNINIIKGNKIGIIGPNGTGKSTLLKLFTKSIKPSSGLIEHGTTLEITYFDQNK
EEEEEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCC
SSLNPNYTLQQTLCPTGGDQIFLSDKTIHAGAYLKSFMFDPKLLSTKVSTLSGGEATRLL
CCCCCCCEEHEEECCCCCCEEEEECCEEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
LAKALIKPGNLLILDEPTNDLDIDTIEILLDILSDYFGTLIVVSHDRDFLNRLVTNTLVF
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEE
EGNGNIINVIGGYQDYIEHYSKLNQHITNPKIAKNNKTVKHLTPKLSTKLSYKFQRMLDS
ECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
IPKEITQLETQVEDLEKKLADPNLYQNNQDKFLLFSKELETSKLRIEELFNTWQKIENRN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
I
C
>Mature Secondary Structure
MKLLPIYYIKYGELSFADQKIFDNLNIYLYPGDKICLIGKNGSGKSSLMKIINSDYQLNK
CCCEEEEEEEECCCCCCHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCC
GEIFQHSATKIAYLQQNVACNLSLKVYDFITQSIPNKENYYQAEIFIEKLQINANKTLRK
CCEECCCCCEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHH
LSGGQLRRVQLAKVLASHAEILLLDEPTNHLDIQAIEWLESYIKSYKGSIICISHDRAFL
CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEE
TAISNKVWWLDRCILHQSNKGFQFFEQWQAQIIDQEESNLIKLNKKINTEQLWLHQGISA
HHHCCCHHEEHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHH
RRKRNQRRLSNLKTLREQLRFSSQRLAKASQKVQFYHSNNESNKARFIIRAENVCFKYND
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCEEEEECC
QFVIKNFNINIIKGNKIGIIGPNGTGKSTLLKLFTKSIKPSSGLIEHGTTLEITYFDQNK
EEEEEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCC
SSLNPNYTLQQTLCPTGGDQIFLSDKTIHAGAYLKSFMFDPKLLSTKVSTLSGGEATRLL
CCCCCCCEEHEEECCCCCCEEEEECCEEEHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
LAKALIKPGNLLILDEPTNDLDIDTIEILLDILSDYFGTLIVVSHDRDFLNRLVTNTLVF
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEE
EGNGNIINVIGGYQDYIEHYSKLNQHITNPKIAKNNKTVKHLTPKLSTKLSYKFQRMLDS
ECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHH
IPKEITQLETQVEDLEKKLADPNLYQNNQDKFLLFSKELETSKLRIEELFNTWQKIENRN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9139905; 7751275 [H]