Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284080

Identifier: 148284080

GI number: 148284080

Start: 157235

End: 157942

Strand: Direct

Name: 148284080

Synonym: OTBS_0160

Alternate gene names: NA

Gene position: 157235-157942 (Clockwise)

Preceding gene: 148284079

Following gene: 148284081

Centisome position: 7.39

GC content: 26.98

Gene sequence:

>708_bases
ATGATTGACGATAATAATGACGATAATAATGATGATAAATTAAAAAATAACCCTGATGAAGAAGATACTAATAATTTGAC
TAAAGAATCTATCTTTACTTCTAGTCAAGATACTTCCTCTGATAACTTGGTCAATGAGTTTTACCAAAAATTAAAAAATA
ATGCAGAATTTGAAGCTGAATTAGAAGCATTAATTAGTAACTTTGAAATTAATCAAGATGTATCAAAGCTGCAAACAAAC
ATTATACTATTAATTAAAAAATTACTGCTTAGTAATTCTTCAGGCTCTACATCTATAAAATTAACTCAAGAGCTTGAACA
GCAAATTACTAAGCAAATTGCTAAAATAAGTAAAGAGTTAATATATAAGCACACAAGAACCTTAGCAGAAGAAAATCAAG
ATTTAGAGCAAAATAAAGATAACTTAGAATATATTTCTGAACCGTCTAGAGCAGAACTAAAGAAAAATCTAAAAAGATTT
GCAATATATGAAGTCTATAAACTGCTTAATCCAAGACGTATTGCAGGAGAAACACGTTTGAGTAATTTTATTCATAATTT
AATAATTGGAGGTGCAAAATATGCACTCAAGTATGGTGGAGGCAATAAAAATGATGTTAGTTATTATAATAATAAATTAC
AAGCAATGAAATTTCATAAAAAATCTGCTGAAAGAGGAGATAAAGATAAAGGAGGAAGAAATAGATAA

Upstream 100 bases:

>100_bases
TTATTATAATAATAAATTACAAGCAATGAAATTTCATAAAAAATCTGCTGAAATATGATATATTATAAGCTCTTATAAAT
CCTTATTCTGAATTTATGCT

Downstream 100 bases:

>100_bases
TAAAATAAAATATTGATTTTCTACTTAGAATTGTGTTATTGTAGTAATAAAAACTTATAAAGGAAATGCTGATTTACCAT
GAATCCAGAGGATATTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN
IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF
AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR

Sequences:

>Translated_235_residues
MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN
IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF
AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR
>Mature_235_residues
MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN
IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF
AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020171
- ProDom:   PD210227 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26984; Mature: 26984

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKEL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
IYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRIAGETRL
HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR
HHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKEL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
IYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRIAGETRL
HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR
HHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]