| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284080
Identifier: 148284080
GI number: 148284080
Start: 157235
End: 157942
Strand: Direct
Name: 148284080
Synonym: OTBS_0160
Alternate gene names: NA
Gene position: 157235-157942 (Clockwise)
Preceding gene: 148284079
Following gene: 148284081
Centisome position: 7.39
GC content: 26.98
Gene sequence:
>708_bases ATGATTGACGATAATAATGACGATAATAATGATGATAAATTAAAAAATAACCCTGATGAAGAAGATACTAATAATTTGAC TAAAGAATCTATCTTTACTTCTAGTCAAGATACTTCCTCTGATAACTTGGTCAATGAGTTTTACCAAAAATTAAAAAATA ATGCAGAATTTGAAGCTGAATTAGAAGCATTAATTAGTAACTTTGAAATTAATCAAGATGTATCAAAGCTGCAAACAAAC ATTATACTATTAATTAAAAAATTACTGCTTAGTAATTCTTCAGGCTCTACATCTATAAAATTAACTCAAGAGCTTGAACA GCAAATTACTAAGCAAATTGCTAAAATAAGTAAAGAGTTAATATATAAGCACACAAGAACCTTAGCAGAAGAAAATCAAG ATTTAGAGCAAAATAAAGATAACTTAGAATATATTTCTGAACCGTCTAGAGCAGAACTAAAGAAAAATCTAAAAAGATTT GCAATATATGAAGTCTATAAACTGCTTAATCCAAGACGTATTGCAGGAGAAACACGTTTGAGTAATTTTATTCATAATTT AATAATTGGAGGTGCAAAATATGCACTCAAGTATGGTGGAGGCAATAAAAATGATGTTAGTTATTATAATAATAAATTAC AAGCAATGAAATTTCATAAAAAATCTGCTGAAAGAGGAGATAAAGATAAAGGAGGAAGAAATAGATAA
Upstream 100 bases:
>100_bases TTATTATAATAATAAATTACAAGCAATGAAATTTCATAAAAAATCTGCTGAAATATGATATATTATAAGCTCTTATAAAT CCTTATTCTGAATTTATGCT
Downstream 100 bases:
>100_bases TAAAATAAAATATTGATTTTCTACTTAGAATTGTGTTATTGTAGTAATAAAAACTTATAAAGGAAATGCTGATTTACCAT GAATCCAGAGGATATTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR
Sequences:
>Translated_235_residues MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR >Mature_235_residues MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDVSKLQTN IILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRF AIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020171 - ProDom: PD210227 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26984; Mature: 26984
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH LEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH IYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRIAGETRL HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR HHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIDDNNDDNNDDKLKNNPDEEDTNNLTKESIFTSSQDTSSDNLVNEFYQKLKNNAEFEAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH LEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIKLTQELEQQITKQIAKISKEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH IYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRIAGETRL HHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRNR HHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]