| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284049
Identifier: 148284049
GI number: 148284049
Start: 115467
End: 116111
Strand: Direct
Name: 148284049
Synonym: OTBS_0116
Alternate gene names: NA
Gene position: 115467-116111 (Clockwise)
Preceding gene: 148284047
Following gene: 148284050
Centisome position: 5.43
GC content: 27.13
Gene sequence:
>645_bases ATGCAGATTTCATGTCCTCAATGTAATACTGTTTTTGCATTGCCTAATAATAAAAATTTAAGTTTTAAAAATATAAGAAA AATCAAATGCTCTAAGTGTCAACATATTTGGATTGGAAAATTACAGGATTTAATATCTGTGCCAATAACTCCAGCAAGTT TTTGTGCAACAGATTATAGTTATCAATTAGGTAACAACATATCCTCTTTATTAAATAGAGAACAATACACAGTATCAATA TCTAGATATTCAGTAATATTGCCGTTCATATTAGCAATTTTAATTTCACTATTATTATTTTTAACAGTAAAATATAATTC AGCAGCACAAGATATAATTTTAGGAGAAAAGAAGCACATTTCATTACATAGAGTTACATCAACATATATTCCTGAAACTA ATCATAGAGTAATACAGTACATACTGTTTAACAACTCATCAACAGCTGTTCACCTTCCAGTTATAAAAATATGCACATAT GACCAAAATAAAAAACTGATAAATTATCATCTATTTAGTAATGAGGAAATAATATTGCAAGCTAGGACTTATGCACTTGC TAAAACAAAGTTTCAGAATGATAATATTCAACTCAGCAGTTTCAGTATCAGTTTGGGAAATAATTCGTTATTTATGATTA ACTAA
Upstream 100 bases:
>100_bases ATTATATTACTCTGTTTTCAAAAAACCTTTGAACAACCTTAATCTTACATATAGAATATAGATAGATAACTTGATAGCGC AATAAAAATTTGAAACATAA
Downstream 100 bases:
>100_bases CTGATGTTATAGGATAAAATATTGAAATAGTGTCATTGCAACAAAACAAGAGTACAAACTAACTCTGAAAAAATTCTTAA ATTGTTGTGAAGTATTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPITPASFCATDYSYQLGNNISSLLNREQYTVSI SRYSVILPFILAILISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSTAVHLPVIKICTY DQNKKLINYHLFSNEEIILQARTYALAKTKFQNDNIQLSSFSISLGNNSLFMIN
Sequences:
>Translated_214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPITPASFCATDYSYQLGNNISSLLNREQYTVSI SRYSVILPFILAILISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSTAVHLPVIKICTY DQNKKLINYHLFSNEEIILQARTYALAKTKFQNDNIQLSSFSISLGNNSLFMIN >Mature_214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPITPASFCATDYSYQLGNNISSLLNREQYTVSI SRYSVILPFILAILISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSTAVHLPVIKICTY DQNKKLINYHLFSNEEIILQARTYALAKTKFQNDNIQLSSFSISLGNNSLFMIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24396; Mature: 24396
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPITPASFCATDYS CCCCCCCCCEEEECCCCCCCCHHHHHHEECCCCCEEHHHHHHHHHHCCCCCHHHHHCCCC YQLGNNISSLLNREQYTVSISRYSVILPFILAILISLLLFLTVKYNSAAQDIILGEKKHI CHHCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCE SLHRVTSTYIPETNHRVIQYILFNNSSTAVHLPVIKICTYDQNKKLINYHLFSNEEIILQ EEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCEEEEE ARTYALAKTKFQNDNIQLSSFSISLGNNSLFMIN EEEEEEEEEEECCCCEEEEEEEEEECCCEEEEEC >Mature Secondary Structure MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPITPASFCATDYS CCCCCCCCCEEEECCCCCCCCHHHHHHEECCCCCEEHHHHHHHHHHCCCCCHHHHHCCCC YQLGNNISSLLNREQYTVSISRYSVILPFILAILISLLLFLTVKYNSAAQDIILGEKKHI CHHCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCE SLHRVTSTYIPETNHRVIQYILFNNSSTAVHLPVIKICTYDQNKKLINYHLFSNEEIILQ EEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCEEEEE ARTYALAKTKFQNDNIQLSSFSISLGNNSLFMIN EEEEEEEEEEECCCCEEEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA