| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284025
Identifier: 148284025
GI number: 148284025
Start: 55786
End: 56679
Strand: Direct
Name: 148284025
Synonym: OTBS_0057
Alternate gene names: NA
Gene position: 55786-56679 (Clockwise)
Preceding gene: 148284024
Following gene: 148284026
Centisome position: 2.62
GC content: 28.41
Gene sequence:
>894_bases ATGATTATTCGAATTATCTTACTTTTAGTAAGCATTTTAATAATTAAAGTACAAGCTTTTCCAGTTTATAATACAAGTAA TATTAGCGCTTTTAAAGAGCTGATAACTTCTGGAGAAAATACTATTCAACTCTTGCTGACAACAATTACTGCAACATCTA ATACAAAATTTCACAAGCTTAAAGAAATATATAGTAAACAGAATTTGAATAGATCATTTGTTAATAAGTTGAATAAAAAC TATCCTGAAGATCAAGGAACACAGTTACTAGTGTTACTACATGGCCTAAGTAAAACTAGTAAATCTTTAAGAGGAATGGA GAAATTTGCTTACAAACAAGGATTCAAAGTATTAAACATTGATTATCCATCTACTAAGTTTCCAATAGAGCATCTAGTAG ATATAATCCATGATAAAATTACTCTCAGCCTTCAACAGCAAAAATATACAAGCATTTCATTTGTTGGAGTTTCTATGGGA GGTCTAGTCATAAGAGCTTATTTACACAAGTATAAAATACCTAATTTAGGAAAAGTAGTATTAATAGGCACACCTAATAA AGGAAGTGAAGTAGCAGATTATCTAAAAAATAATAAACTTTATAAAAAATTTACCGGTCCTGCTGGTCAACAATTAATCA CTAATCAAAAAGAATTTAATAATATTTTTGGCGATATATATTACGAGTGCGGAGTAATATCAGGTAATCTACCACTGGAT CTTTGTTGTATATTTATGAAAGGAAAACCAAGCGATGGTAAAGTAACTATAGAAAGCACTAAAATTGAAGGCATGCAAGA CCATATAGTACTAAAAATTCCTCATTGGTATTTAGAAAAGAGTAAAAAAGTGTGGCTTTATACTTTATATTTTCTTAAAT ATTCAAAATTTTGA
Upstream 100 bases:
>100_bases GATTTTGTTTGATTAATAATTAAAAATAGCTCTGCCAACTGAAAATTTTCATTAATTTGCAAATTTCTAAAAAATAACCT AAAAGTTATAGAAAATAATA
Downstream 100 bases:
>100_bases AAATCAATTAGGATTTTTGCGCAAACTTAACTTTATATTGAATATCAAGTAGGCTTTGCTTTAAGGAGTTGCTATCATTA CCTAACATAGCTGCGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase Or Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Triacylglycerol Lipase; Lipase B; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Family Hydrolase; Lipase LipB; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MIIRIILLLVSILIIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YPEDQGTQLLVLLHGLSKTSKSLRGMEKFAYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
Sequences:
>Translated_297_residues MIIRIILLLVSILIIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YPEDQGTQLLVLLHGLSKTSKSLRGMEKFAYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF >Mature_297_residues MIIRIILLLVSILIIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN YPEDQGTQLLVLLHGLSKTSKSLRGMEKFAYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33859; Mature: 33859
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRIILLLVSILIIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL CHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH KEIYSKQNLNRSFVNKLNKNYPEDQGTQLLVLLHGLSKTSKSLRGMEKFAYKQGFKVLNI HHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEE LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHEEEEEECCCCCE LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC >Mature Secondary Structure MIIRIILLLVSILIIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL CHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH KEIYSKQNLNRSFVNKLNKNYPEDQGTQLLVLLHGLSKTSKSLRGMEKFAYKQGFKVLNI HHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEE LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHEEEEEECCCCCE LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA