Definition Clavibacter michiganensis subsp. michiganensis NCPPB 382 chromosome, complete genome.
Accession NC_009480
Length 3,297,891

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The map label for this gene is intA

Identifier: 148273470

GI number:

Start: 2587139

End: 2588842

Strand: Direct

Name: intA

Synonym: CMM_2286

Alternate gene names: NA

Gene position: NA

Preceding gene: 148273468

Following gene: 148273474

Centisome position: NA

GC content: NA

Gene sequence:

>1704_bases
GTGATCGCGAGAGGGGTACGCATCATCGACGAAACGGCTGCCATCTACACGCGAATCTCCCGCGACTCGGCTGGTGAGGG
CTTAGGTGTCGAGCGCCAGTTGGACGACTGCCAGCTCCTCGCGCAGCGACTCGGCTTAGCCGTCGTGAAGGTCTACTCCG
ACAACGACATAAGCGCTAGCGACGTTGCCGTGAAAAAGAAGGCACGTCCCGGCTACAGCAGCATGCTTGCTGATGCACGA
GCCGGTGCGTTTACGCACATCATCGCGCACTCGAACAGCCGCCTGACGCGACGAATGCTTGAACTGGAAGACCTGATCAA
GCTGTTCGATCAGACCGGCGTCGTCATCCAAACCGTTAAGTCAGGCCAAGACGATCTGTCCACAAGCGACGGTCGCATGG
TTGCCCGCATCAAAGCCAGCGTGGATATTGCCGAATCGGATCGCATCAGCGAACGCGCGAAAGCGGCTCACCGCCAGAAG
GCCCTCAAAGGCGAGGTGAAGGTACAGGCGAAGCGGCCGTTCGGTTTTCAAAAAGATTGCGTGACGCACGAACCCACAGA
AGCCGCACTGATTCGTGAAGCCGTCATGAAGATCATCGGGGGCGCGCCGATCACGCAGATCCAGCAGGAGTGGAAGGCCG
CTGGCATCAAGACCTCTACCGGCCTCGACGAATGGCGGTGGCTGCCGCTTCGACGTGTACTACTTGGCGCTCGTACAGTA
GGCATCCGCGAGTACAAGGGTGAAGAGCTTTTTGTTGACGGTGAGGTCGTGATGGGCAACTGGGAGCCGATCATCACCGT
TGCCGAACGAGACCAGGCGCTGGCTGTACTGCAGGGCCGCAGCAAGACGAAGGTGCGCCGAGGGCACTGGTTGTTGTCGG
GACTGCTCACTTGTGGCAAGTGTGGCGCACCCATGTACGGGTCTCTTGGTTCACCGAAGAAGGCACCTGAGGGTAGCGAG
GCGGGCGACTACGCGCGACCGAACACGTACTCATGCAACAACGCGAACTCGCATCTTGCGATCACTTCGGACCGCCTTGA
GAAGTACCTACAGCAGGTCGTCTTTCGCTACATCTTGGACAGGACTACGTACGGGACGCCGCAAGTAGTGCAGCCCGAAT
CTGATGACTGGCCGCAGGAACAACAGCTTGTGGACACCTCCGCGAAGATCGATGAACTCATGGAGGCCTACAACAGCGGC
GACCTTTCCGGAAGCATTGTCTTTCCCGAGGTGAAGAAACTCGACCAGCAAAGACGTGACCTACGCCGCGATCGCGATGC
GTTCTATGCGTCGATAGCCCCTGTACCGACAGACGTGACTAACTGGTGGGTTGCAACACGAAGCTACATGGATATGACGC
GGGAGCCGCTTGACGTGCGGCGACGTCTGCTTGCGCAGGAGGTTGAGTCCGTCGTCATCGGTCCGGGTGAACGTGGCCAC
GGCGGCAAGTCTTTCGAAGCGTTCATGAAGCGCGTGACGATTCAGTGGCACGAGCCGCACCCCGAGTACAACGGGCGTTC
AGCCGAAGAATCGGCAAAGGAACTGCTTGTGCACATGGATCTCGACAAGACGTTCGAGCCTCGGCCGCGTCAACTGCAAC
CGTCACGAGGACCGAAAGCCATGGAACAGGCACTACGCGATTGTGAGCGACGCCGTGAAGACCGCGATCGTCGAGCACAG
CGACGCAACGAATCGACTAGCTGA

Upstream 100 bases:

>100_bases
TAGGGACTCTGCCCCAAGAAGATGTGCCATCGTTACAACCGTAGTCCCTGTAATGTGACGACGACAACGACCGTTCGATG
TTGCTGCGCGCGCATGATCG

Downstream 100 bases:

>100_bases
CACTCTAACGGCCTCTACGCGCTCACCTGAACACACTCACGCCCCTGCCCTGTGAGCCGCTTAGATCAGCTCCTGCCGTC
GCTCTGTGGTGAATGGCGGC

Product: putative integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>567_residues
MIARGVRIIDETAAIYTRISRDSAGEGLGVERQLDDCQLLAQRLGLAVVKVYSDNDISASDVAVKKKARPGYSSMLADAR
AGAFTHIIAHSNSRLTRRMLELEDLIKLFDQTGVVIQTVKSGQDDLSTSDGRMVARIKASVDIAESDRISERAKAAHRQK
ALKGEVKVQAKRPFGFQKDCVTHEPTEAALIREAVMKIIGGAPITQIQQEWKAAGIKTSTGLDEWRWLPLRRVLLGARTV
GIREYKGEELFVDGEVVMGNWEPIITVAERDQALAVLQGRSKTKVRRGHWLLSGLLTCGKCGAPMYGSLGSPKKAPEGSE
AGDYARPNTYSCNNANSHLAITSDRLEKYLQQVVFRYILDRTTYGTPQVVQPESDDWPQEQQLVDTSAKIDELMEAYNSG
DLSGSIVFPEVKKLDQQRRDLRRDRDAFYASIAPVPTDVTNWWVATRSYMDMTREPLDVRRRLLAQEVESVVIGPGERGH
GGKSFEAFMKRVTIQWHEPHPEYNGRSAEESAKELLVHMDLDKTFEPRPRQLQPSRGPKAMEQALRDCERRREDRDRRAQ
RRNESTS

Sequences:
NA

Specific function: NA

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA