| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is mnmG
Identifier: 148269142
GI number: 148269142
Start: 2902450
End: 2904327
Strand: Reverse
Name: mnmG
Synonym: SaurJH9_2733
Alternate gene names: 148269142
Gene position: 2904327-2902450 (Counterclockwise)
Preceding gene: 148269143
Following gene: 148269141
Centisome position: 99.92
GC content: 35.41
Gene sequence:
>1878_bases GTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGG TGCTAAAACATTAATGCTAACAATAAATTTAGATAATATTGCATTTATGCCATGTAACCCATCTGTAGGTGGACCAGCTA AAGGCATCGTTGTTCGTGAAATTGATGCTTTAGGTGGACAAATGGCAAAAACAATCGATAAAACACACATTCAAATGAGA ATGTTAAATACAGGTAAAGGACCTGCTGTAAGAGCACTAAGAGCGCAAGCAGATAAAGTACTTTATCAACAAGAAATGAA ACGCGTGATTGAAGATGAAGAAAATTTGCATATAATGCAAGGTATGGTAGACGAACTTATTATAGAAGATAATGAAGTTA AAGGTGTACGTACAAATATTGGTACAGAGTATTTATCTAAAGCAGTAATTATTACAACGGGAACATTTTTACGTGGTGAA ATCATTTTAGGTAATATGAAGTATTCAAGTGGACCAAATCACCAATTACCATCAATCACATTATCAGACAATTTAAGAGA ACTTGGTTTTGATATTGTTCGTTTTAAAACAGGTACACCACCGCGTGTAAATTCAAAAACAATTGACTATTCGAAGACTG AAATACAACCAGGTGACGATGTAGGTCGTGCATTCAGCTTTGAAACAACAGAATATATATTAGATCAATTGCCATGTTGG CTAACGTATACTAATGCTGAAACACACAAAGTTATCGATGATAATTTACATCTATCTGCAATGTATTCAGGGATGATTAA AGGAACCGGGCCACGTTATTGCCCTTCAATTGAAGATAAATTTGTTCGATTTAATGATAAGCCGCGACATCAACTTTTCT TAGAGCCTGAAGGTCGTAATACAAATGAAGTATATGTGCAAGGATTGTCTACAAGTCTTCCTGAACATGTGCAACGTCAA ATGTTAGAGACGATACCAGGTCTTGAAAAAGCAGATATGATGCGTGCCGGCTACGCAATTGAATATGATGCGATTGTGCC AACGCAGTTATGGCCTACACTTGAAACGAAAATGATTAAAAACTTATATACTGCAGGTCAAATTAATGGTACATCTGGTT ATGAAGAAGCAGCAGGACAAGGATTGATGGCAGGTATTAACGCTGCAGGTAAAGTGTTAAACACAGGCGAAAAGATATTA AGTCGTTCAGATGCATATATTGGTGTCTTAATCGATGATCTTGTAACTAAAGGTACTAATGAACCTTATCGTTTACTAAC ATCACGTGCAGAATATCGTTTGTTACTACGTCATGATAATGCTGATTTGAGATTGACGGATATGGGATATGAACTTGGTA TGATTTCTGAAGAACGATATGCACGTTTTAATGAAAAACGTCAGCAAATTGATGCGGAAATTAAGCGTTTATCAGATATT CGTATTAAACCAAACGAACATACGCAAGCGATTATCGAACAACATGGTGGTTCTCGCTTAAAAGATGGTATTTTAGCTAT CGATTTATTACGCAGACCTGAAATGACTTACGATATAATTTTAGAAATTTTAGAAGAAGAACATCAATTGAATGCAGATG TTGAAGAACAAGTAGAAATACAAACAAAATATGAAGGTTATATCAATAAATCACTACAACAAGTTGAGAAAGTTAAGCGT ATGGAAGAGAAGAAAATTCCAGAAGACTTAGATTATAGTAAGATTGATAGTTTGGCGACTGAAGCGCGAGAAAAATTATC AGAAGTAAAACCTTTAAATATTGCACAAGCTTCTAGAATATCAGGGGTAAATCCAGCAGACATATCTATATTATTGATTT ACTTAGAACAAGGTAAACTCCAAAGGGTGAGTGACTAA
Upstream 100 bases:
>100_bases TCAGTTATTCAGTCAATTCTGCTTAGGTAAATAGTAATTGAAATAGACGGAATATCGTCTTAAGAAGGCTAGTAAGATAT CAAATAAGGAGGTTTATATT
Downstream 100 bases:
>100_bases TGACTGTAGAATGGTTAGCAGAACAATTAAAAGAACATAATATTGAATTAACTGAGACTCAAAAACAACAGTTTCAAACA TATTATCGTTTACTTGTTGA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMR MLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQ MLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKIL SRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI RIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKR MEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD
Sequences:
>Translated_625_residues MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMR MLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQ MLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKIL SRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI RIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKR MEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD >Mature_625_residues MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMR MLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGE IILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQ MLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKIL SRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI RIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKR MEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=630, Percent_Identity=42.2222222222222, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI19882217, Length=656, Percent_Identity=40.5487804878049, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI183227703, Length=670, Percent_Identity=39.7014925373134, Blast_Score=446, Evalue=1e-125, Organism=Escherichia coli, GI2367273, Length=621, Percent_Identity=51.8518518518518, Blast_Score=624, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17534255, Length=620, Percent_Identity=40.6451612903226, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321202, Length=624, Percent_Identity=42.3076923076923, Blast_Score=470, Evalue=1e-133, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=42.7672955974843, Blast_Score=469, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_STAA1 (A7X7A7)
Other databases:
- EMBL: AP009324 - RefSeq: YP_001443285.1 - ProteinModelPortal: A7X7A7 - SMR: A7X7A7 - STRING: A7X7A7 - EnsemblBacteria: EBSTAT00000003275 - GeneID: 5559287 - GenomeReviews: AP009324_GR - KEGG: saw:SAHV_2695 - eggNOG: COG0445 - GeneTree: EBGT00050000025123 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - BioCyc: SAUR418127:SAHV_2695-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 70117; Mature: 70117
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 123-123 BINDING 178-178 BINDING 367-367
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE CCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCCEEEEE IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ HHHHCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT HHHHHHHCCCCCCCCHHHHCCHHHHCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEE LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW CCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCE LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN EEECCCCCCEEECCCCEEEHHHHCHHCCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCC TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK CCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHCCHHHHHHHH NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN HHHHCCCCCCCCCHHHHCCCCCEECHHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHCCCC EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI CHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCC RIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI EECCCHHHHHHHHHCCCCHHHCCHHEEHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEEE QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC SGVNPADISILLIYLEQGKLQRVSD CCCCCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE CCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCCEEEEE IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQ HHHHCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSIT HHHHHHHCCCCCCCCHHHHCCHHHHCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEE LSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCW CCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCCE LTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN EEECCCCCCEEECCCCEEEHHHHCHHCCCCCCCCCCCCHHHEECCCCCCCEEEECCCCCC TNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIK CCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHCCHHHHHHHH NLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTN HHHHCCCCCCCCCHHHHCCCCCEECHHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHCCCC EPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDI CHHHHHHCCCCEEEEEEECCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCC RIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEI EECCCHHHHHHHHHCCCCHHHCCHHEEHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEEE QTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC SGVNPADISILLIYLEQGKLQRVSD CCCCCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA