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The map label for this gene is xynC [H]

Identifier: 148269062

GI number: 148269062

Start: 2809359

End: 2810120

Strand: Reverse

Name: xynC [H]

Synonym: SaurJH9_2653

Alternate gene names: 148269062

Gene position: 2810120-2809359 (Counterclockwise)

Preceding gene: 148269063

Following gene: 148269061

Centisome position: 96.68

GC content: 32.94

Gene sequence:

>762_bases
ATGGCTTATATTTCATTAAACTATCATTCACCAACAATTGGTATGCATCAAAATTTGACAGTCATTTTACCGGAAGATCA
AAGCTTCTTTAATAACGATATAACTGCTAAACCATTAAAAACTTTAATGTTGTTACATGGATTATCAAGTGATGAAACGA
CATATATGAGATATACAAGCATAGAAAGGTATGCGAATGAACACAAATTAGCTGTGATTATGCCCAATGTGGATCATAGC
GCATATGCTAACATGGCATATGGTCATAGCTATTATGATTATATTTTGGAAGTATATGATTATGTTCATCAAATATTTCC
ACTTTCCAAAAAGCGTGATGACAATTTTATAGCAGGTCACTCTATGGGAGGATATGGCACAATTAAATTTGCATTAACAC
AAGGGGATAAATTTGCCAAAGCTGTACCATTATCTGCTGTGTTTGAAGCGCAAAATTTAATGGATCTAGAGTGGAATGAT
TTTTCAAAAGAGGCCATAATTGGCAATCTTTCAAGTGTTAAAGGAACTGAACATGATCCGTATTATTTGCTAGACAAAGC
TGTAGCTGAAGATAAACAAATTCCAAAATTGCTCATTATGTGTGGTAAACAAGACTTTTTATATCAAGACAACTTAGATT
TTATCGATTATTTATCACGTAAAAATGTTCCTTATCAATTTGAAGATGGACCAGGAGATCATGATTATGCATATTGGGAC
CAAGCGATTAAGCGTGCTATAACATGGATGGTGAATGATTAA

Upstream 100 bases:

>100_bases
GAATACATTTGTATTCGGTTTTTTTGTTGAAAATGATTTTAAAGTGAATTGATTAAGCGTAAAATGTTGATAAAGTAGAA
TTAGAAAGGGGTCATGACGT

Downstream 100 bases:

>100_bases
TTATTTCCTGGAAAATATGTGGTTGCATTAAATACACAGAGTGAGAGATACAAACTATTTACGCACGACTAACATTTCTG
AGTGTTTAAATTAAATTTGT

Product: esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAYISLNYHSPTIGMHQNLTVILPEDQSFFNNDITAKPLKTLMLLHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHS
AYANMAYGHSYYDYILEVYDYVHQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWND
FSKEAIIGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYLSRKNVPYQFEDGPGDHDYAYWD
QAIKRAITWMVND

Sequences:

>Translated_253_residues
MAYISLNYHSPTIGMHQNLTVILPEDQSFFNNDITAKPLKTLMLLHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHS
AYANMAYGHSYYDYILEVYDYVHQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWND
FSKEAIIGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYLSRKNVPYQFEDGPGDHDYAYWD
QAIKRAITWMVND
>Mature_252_residues
AYISLNYHSPTIGMHQNLTVILPEDQSFFNNDITAKPLKTLMLLHGLSSDETTYMRYTSIERYANEHKLAVIMPNVDHSA
YANMAYGHSYYDYILEVYDYVHQIFPLSKKRDDNFIAGHSMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWNDF
SKEAIIGNLSSVKGTEHDPYYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYLSRKNVPYQFEDGPGDHDYAYWDQ
AIKRAITWMVND

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 29122; Mature: 28991

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYISLNYHSPTIGMHQNLTVILPEDQSFFNNDITAKPLKTLMLLHGLSSDETTYMRYTS
CEEEEEECCCCCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHH
IERYANEHKLAVIMPNVDHSAYANMAYGHSYYDYILEVYDYVHQIFPLSKKRDDNFIAGH
HHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
SMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWNDFSKEAIIGNLSSVKGTEHDP
CCCCCEEEEEEEECCCCHHHHCCHHHHHHHCCCEECCCCCCCCHHHHCCHHHCCCCCCCC
YYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYLSRKNVPYQFEDGPGDHDYAYWD
HHHHHHHHHCCCCCCEEEEEECCCCCEECCCCHHHHHHHCCCCCEEECCCCCCCCHHHHH
QAIKRAITWMVND
HHHHHHHHHEECC
>Mature Secondary Structure 
AYISLNYHSPTIGMHQNLTVILPEDQSFFNNDITAKPLKTLMLLHGLSSDETTYMRYTS
EEEEEECCCCCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEHH
IERYANEHKLAVIMPNVDHSAYANMAYGHSYYDYILEVYDYVHQIFPLSKKRDDNFIAGH
HHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
SMGGYGTIKFALTQGDKFAKAVPLSAVFEAQNLMDLEWNDFSKEAIIGNLSSVKGTEHDP
CCCCCEEEEEEEECCCCHHHHCCHHHHHHHCCCEECCCCCCCCHHHHCCHHHCCCCCCCC
YYLLDKAVAEDKQIPKLLIMCGKQDFLYQDNLDFIDYLSRKNVPYQFEDGPGDHDYAYWD
HHHHHHHHHCCCCCCEEEEEECCCCCEECCCCHHHHHHHCCCCCEEECCCCCCCCHHHHH
QAIKRAITWMVND
HHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]