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The map label for this gene is nrdD [H]

Identifier: 148269049

GI number: 148269049

Start: 2793339

End: 2795189

Strand: Reverse

Name: nrdD [H]

Synonym: SaurJH9_2640

Alternate gene names: 148269049

Gene position: 2795189-2793339 (Counterclockwise)

Preceding gene: 148269050

Following gene: 148269048

Centisome position: 96.16

GC content: 34.58

Gene sequence:

>1851_bases
ATGAATCAAATCGAAGAAGCATTAACGGGTTTGATTTCTAAAGATCCTGCTATTGTTAACGAAAATGCCAACAAAGATAG
TGATACATTTTCAACAATGAGAGATTTAACAGCAGGTATCGTTTCTAAATCTTACGCATTAAATTATTTATTACCAAAGC
ACGTTGCAGATGCACATCAAAGAGGGGACATACATTTTCACGACTTAGATTATCATCCATTCCAACCGTTAACAAACTGT
TGTTTAATAGATGCTAAAAATATGCTACATAATGGATTTGAAATAGGCAACGCGAATGTAACTTCACCAAAATCAATACA
AACTGCATCAGCGCAGCTTGTACAAATTATAGCCAATGTTTCCAGCAGTCAATATGGTGGCTGTACGGTTGACCGCGTTG
ACGAATTACTTAGTACATATGCACGACATAATGAAGAACAACATAGAAATATCGCAAAGCAATTTGTCAAAGAATCTGAA
ATTGATCGTTATGTTGATCAACAAGTCACTAAAGACATCAATGATGCGATTGAAAGTCTAGAATATGAAATTAATACCTT
ATATACATCTAATGGACAGACACCTTTTGTAACATTAGGATTCGGCTTAGGTACAGATCATTTAAGTCGCAAAATTCAAC
AAGCTATCTTAAATACTCGTATCAAAGGCTTAGGAAAAGACCGCACGACAGCGATTTTCCCAAAACTTGTATTTTCAATT
AAAAAAGGAACCAACTTTAGTCCGCAAGATCCGAACTATGACATTAAACAACTAGCATTAAAGTGTTCAACGAAACGTAT
GTATCCAGATATTTTAAATTATGACAAACTCGTAGAAATATTAGGTGATTTCAAAGCGCCAATGGGTTGTCGTTCATTTT
TACCAAGTTGGAAAGATGCGGAAGGTCATTTTGAAAATAATGGTCGTTGTAATCTTGGTGTTGTTACACTTAATTTACCT
AGAATGGCATTAGAATCTGCCGGTAATATGACGAAATTCTGGGAAATCTTTTATGAACGTATCGATGTGTTACATGATGC
ATTACTTTATCGTATAAATCGTTTGAAAGATGCTGTACCGAATAACGCACCAATTTTATATAAAAGTGGCGCTTTTAACT
ATAAATTAAAAGAAACAGATGATGTTGCTGAGTTATTTAAAAATAAACGTGCAACGATTTCAATGGGCTATATAGGGTTG
TATGAAACAGCTACTGTTTTCTATGGTCCAGACTGGGAAACATCTCAAGAAGCAAAAGCATTTACGCTTGAAATTCTTAA
AGAAATGAAACGTTATCAAACGAAATGGACAGAATTATATGACATTTGGTTCAGTATTTACAGTACGCCGAGTGAATCGC
TAACGGATCGTTTTTGTCGTTTAGACCAAGAGAGATTTGGAGATATTAAAGACATTACAGATAAAGGATATTATCAAAAC
TCTTTCCATTATGATGTACGTAAAGATGTTACACCTTTTGAAAAGTTAGATTTTGAAAAAGATTATCCTTATTATGCGAG
TGGTGGTTTCATTCACTATTGTGAGTATCCGAAATTGCAACACAATTTGAAAGCACTAGAAGCGGTATGGGACTACTCTT
ATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCA
ACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGTTGATGTCGTTAAACGAACATGTGGTTA
CTTAGGCAATCCAGTTCAACGTCCAGTAATTAAAGGCCGTCATAAAGAAATTTGCGCACGAGTAAAACATATGAAAGCGC
CTAAAGAATGA

Upstream 100 bases:

>100_bases
TTTGTGACGTTTTAGTTAACAGACTAATAAAAATTTGAAAATACTATATATAGTGGTATAACGTAATGAGTAGACACAAT
ATATAGGAAGAAGGGGTAAA

Downstream 100 bases:

>100_bases
CACTTTTAGACATTAAACAAGGACAAGGTTATATTGCTAAAATAGAATCAAATAGCTTTGTTGACGGTGAAGGAGTAAGA
TGCAGTGTTTATGTATCAGG

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKSYALNYLLPKHVADAHQRGDIHFHDLDYHPFQPLTNC
CLIDAKNMLHNGFEIGNANVTSPKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILNTRIKGLGKDRTTAIFPKLVFSI
KKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDKLVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLP
RMALESAGNMTKFWEIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRATISMGYIGL
YETATVFYGPDWETSQEAKAFTLEILKEMKRYQTKWTELYDIWFSIYSTPSESLTDRFCRLDQERFGDIKDITDKGYYQN
SFHYDVRKDVTPFEKLDFEKDYPYYASGGFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEA
TEKGFKCPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE

Sequences:

>Translated_616_residues
MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKSYALNYLLPKHVADAHQRGDIHFHDLDYHPFQPLTNC
CLIDAKNMLHNGFEIGNANVTSPKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILNTRIKGLGKDRTTAIFPKLVFSI
KKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDKLVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLP
RMALESAGNMTKFWEIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRATISMGYIGL
YETATVFYGPDWETSQEAKAFTLEILKEMKRYQTKWTELYDIWFSIYSTPSESLTDRFCRLDQERFGDIKDITDKGYYQN
SFHYDVRKDVTPFEKLDFEKDYPYYASGGFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEA
TEKGFKCPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE
>Mature_616_residues
MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKSYALNYLLPKHVADAHQRGDIHFHDLDYHPFQPLTNC
CLIDAKNMLHNGFEIGNANVTSPKSIQTASAQLVQIIANVSSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESE
IDRYVDQQVTKDINDAIESLEYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILNTRIKGLGKDRTTAIFPKLVFSI
KKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDKLVEILGDFKAPMGCRSFLPSWKDAEGHFENNGRCNLGVVTLNLP
RMALESAGNMTKFWEIFYERIDVLHDALLYRINRLKDAVPNNAPILYKSGAFNYKLKETDDVAELFKNKRATISMGYIGL
YETATVFYGPDWETSQEAKAFTLEILKEMKRYQTKWTELYDIWFSIYSTPSESLTDRFCRLDQERFGDIKDITDKGYYQN
SFHYDVRKDVTPFEKLDFEKDYPYYASGGFIHYCEYPKLQHNLKALEAVWDYSYDKVGYLGTNIPIDHCYECDYDGDFEA
TEKGFKCPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGRHKEICARVKHMKAPKE

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=611, Percent_Identity=52.8641571194763, Blast_Score=681, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 70506; Mature: 70506

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00850 GLY_RADICAL_1 ; PS51149 GLY_RADICAL_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKSYALNYLLPKHVADAHQ
CCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGDIHFHDLDYHPFQPLTNCCLIDAKNMLHNGFEIGNANVTSPKSIQTASAQLVQIIANV
CCCEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
SSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESEIDRYVDQQVTKDINDAIESL
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILNTRIKGLGKDRTTAIFPKLVFSI
HHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDKLVEILGDFKAPMGCRSFLPSWKDA
HCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHCCCCCCC
EGHFENNGRCNLGVVTLNLPRMALESAGNMTKFWEIFYERIDVLHDALLYRINRLKDAVP
CCCCCCCCEEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NNAPILYKSGAFNYKLKETDDVAELFKNKRATISMGYIGLYETATVFYGPDWETSQEAKA
CCCCEEEECCCCEEEECCCHHHHHHHCCCCCEEEECEEEEECCEEEEECCCCCCCHHHHH
FTLEILKEMKRYQTKWTELYDIWFSIYSTPSESLTDRFCRLDQERFGDIKDITDKGYYQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHHCCCCCCCC
SFHYDVRKDVTPFEKLDFEKDYPYYASGGFIHYCEYPKLQHNLKALEAVWDYSYDKVGYL
CCCCCHHCCCCCHHHCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
GTNIPIDHCYECDYDGDFEATEKGFKCPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGR
CCCCCHHHCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCH
HKEICARVKHMKAPKE
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQIEEALTGLISKDPAIVNENANKDSDTFSTMRDLTAGIVSKSYALNYLLPKHVADAHQ
CCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGDIHFHDLDYHPFQPLTNCCLIDAKNMLHNGFEIGNANVTSPKSIQTASAQLVQIIANV
CCCEEEEECCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
SSSQYGGCTVDRVDELLSTYARHNEEQHRNIAKQFVKESEIDRYVDQQVTKDINDAIESL
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYEINTLYTSNGQTPFVTLGFGLGTDHLSRKIQQAILNTRIKGLGKDRTTAIFPKLVFSI
HHHHEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KKGTNFSPQDPNYDIKQLALKCSTKRMYPDILNYDKLVEILGDFKAPMGCRSFLPSWKDA
HCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHCCCCCCC
EGHFENNGRCNLGVVTLNLPRMALESAGNMTKFWEIFYERIDVLHDALLYRINRLKDAVP
CCCCCCCCEEEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NNAPILYKSGAFNYKLKETDDVAELFKNKRATISMGYIGLYETATVFYGPDWETSQEAKA
CCCCEEEECCCCEEEECCCHHHHHHHCCCCCEEEECEEEEECCEEEEECCCCCCCHHHHH
FTLEILKEMKRYQTKWTELYDIWFSIYSTPSESLTDRFCRLDQERFGDIKDITDKGYYQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHHCCCCCCCC
SFHYDVRKDVTPFEKLDFEKDYPYYASGGFIHYCEYPKLQHNLKALEAVWDYSYDKVGYL
CCCCCHHCCCCCHHHCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
GTNIPIDHCYECDYDGDFEATEKGFKCPNCGNDNPKTVDVVKRTCGYLGNPVQRPVIKGR
CCCCCHHHCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCH
HKEICARVKHMKAPKE
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]