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The map label for this gene is yeaV [H]

Identifier: 148269046

GI number: 148269046

Start: 2790665

End: 2792287

Strand: Reverse

Name: yeaV [H]

Synonym: SaurJH9_2637

Alternate gene names: 148269046

Gene position: 2792287-2790665 (Counterclockwise)

Preceding gene: 148269048

Following gene: 148269044

Centisome position: 96.06

GC content: 35.49

Gene sequence:

>1623_bases
TTGAAAAAAGAGAAAGTTATGGACTGGACGACCTTTATAGGGACAGTAGCTGTACTTCTTTTTGCAGTTATACCTATGAT
GGCTTTTCCAAAAGCAAGTGAAGATATCATCACTGGTATTAATAGTGCCATTTCTGATTCAATTGGTTCGATATATTTAT
TTATGGGGCTGGCGATTTTTTGCTTTGTAATGTATATCGCATTTGGTAAATATGGTAATGTCACACTTGGTAAAGCAAGT
GATAAACCAGAATTTAATACATTTACATGGGCGGCAATGCTGTTTTGTGCAGGCATAGGCTCTGATATTTTATACTGGGG
CGTTATTGAATGGGCTTTTTACTATCAAGTTCCACCAAATGGCGCGAAAAGTATGAGTGATGAAGCACTCCAATATGCGA
CGCAATATGGTATGTTCCACTGGGGACCAATTGCTTGGGCTATTTACGTTTTACCAGCATTACCAATTGGTTATTTAGTG
TTTGTTAAAAAACAACCGGTGTATAAAATTAGTCAAGCTTGTCGTCCGATTTTAAAAGGTCAAACAGATAAATTTGTAGG
TAAAGTTGTAGATATCTTATTTATCTTTGGATTGCTAGGTGGTGCGGCAACATCACTAGCGTTAGGTGTGCCATTAATTT
CTGCAGGCATAGAAAGATTAACTGGTTTAGATGGTAAAAATATGATTTTACGTTCGGCTATTTTATTAACGATTACGGTC
ATATTTGCTATTAGTTCATATACAGGATTGAAAAAAGGTATTCAAAAGTTAAGTGATATCAACGTTTGGCTATCATTTGT
ACTTTTAGCCTTTATATTTATTATTGGACCGACTGTTTTTATTATGGAAACGACAGTGACAGGGTTCGGAAATATGTTGA
GAGATTTTTTCCATATGGCAACATGGTTAGAACCATTCGGTGGTATTAAAGGTCGAAAAGAAACGAATTTCCCACAAGAC
TGGACAATATTCTACTGGTCATGGTGGTTAGTATATGCGCCATTTATCGGTTTATTTATCGCTAGAATTTCAAAAGGTAG
ACGCCTTAAAGAAGTCGTGCTAGGAACAATTATTTATGGAACGCTTGGATGCGTATTATTCTTTGGTATTTTTGGTAACT
ATGCTGTGTATTTACAAATTTCTGGACAGTTTAATGTAACACAATATTTAAATACACATGGTACAGAGGCAACCATTATT
GAAGTGGTGCATCATTTACCATTCCCATCATTGATGATTGTACTATTCTTAGTATCTGCTTTCTTATTCTTAGCAACAAC
ATTTGATTCGGGTTCATATATTTTAGCGGCAGCATCTCAGAAAAAAGTGGTAGGCGAACCATTACGTGCCAATCGTTTAT
TCTGGGCATTTGCATTGTGCTTATTGCCATTTTCATTGATGCTAGTTGGTGGCGAACGTGCATTAGAAGTATTGAAAACT
GCTTCAATACTGGCAAGTGTGCCATTAATTGTTATTTTTATTTTCATGATGATATCATTTTTAATCATTTTAGGGCGCGA
TAGAATTAAACTTGAAACGCGTGCTGAAAAATTAAAAGAAGTTGAACGTCGTTCATTGCGAATCGTTCAAGTATCAGAAG
AAGAACAAGACGATAATTTATAA

Upstream 100 bases:

>100_bases
TAAATATTAGTTATTGTCAATTTTGTGAATCAATATAATTATTACATTTTGAGATAAATCGAAACAGGATTCATAAAATT
AATAATTAGGGGGAGCACAA

Downstream 100 bases:

>100_bases
TTCAAATAATGATGCATAAGATTTTGAATTTTATAAGTATATAATTGATTGTCATATAAAACAAAAACGGTAATTTCTAT
TTATTGAGATAGAAATTACC

Product: choline transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAISDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKAS
DKPEFNTFTWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIERLTGLDGKNMILRSAILLTITV
IFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIGPTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQD
WTIFYWSWWLVYAPFIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNTHGTEATII
EVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRANRLFWAFALCLLPFSLMLVGGERALEVLKT
ASILASVPLIVIFIFMMISFLIILGRDRIKLETRAEKLKEVERRSLRIVQVSEEEQDDNL

Sequences:

>Translated_540_residues
MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAISDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKAS
DKPEFNTFTWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIERLTGLDGKNMILRSAILLTITV
IFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIGPTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQD
WTIFYWSWWLVYAPFIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNTHGTEATII
EVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRANRLFWAFALCLLPFSLMLVGGERALEVLKT
ASILASVPLIVIFIFMMISFLIILGRDRIKLETRAEKLKEVERRSLRIVQVSEEEQDDNL
>Mature_540_residues
MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAISDSIGSIYLFMGLAIFCFVMYIAFGKYGNVTLGKAS
DKPEFNTFTWAAMLFCAGIGSDILYWGVIEWAFYYQVPPNGAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLV
FVKKQPVYKISQACRPILKGQTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIERLTGLDGKNMILRSAILLTITV
IFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIGPTVFIMETTVTGFGNMLRDFFHMATWLEPFGGIKGRKETNFPQD
WTIFYWSWWLVYAPFIGLFIARISKGRRLKEVVLGTIIYGTLGCVLFFGIFGNYAVYLQISGQFNVTQYLNTHGTEATII
EVVHHLPFPSLMIVLFLVSAFLFLATTFDSGSYILAAASQKKVVGEPLRANRLFWAFALCLLPFSLMLVGGERALEVLKT
ASILASVPLIVIFIFMMISFLIILGRDRIKLETRAEKLKEVERRSLRIVQVSEEEQDDNL

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=459, Percent_Identity=35.7298474945534, Blast_Score=302, Evalue=4e-83,
Organism=Escherichia coli, GI1786506, Length=473, Percent_Identity=30.2325581395349, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1786224, Length=475, Percent_Identity=29.0526315789474, Blast_Score=212, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 60255; Mature: 60255

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAISDSIGSIYLFMGLAIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFVMYIAFGKYGNVTLGKASDKPEFNTFTWAAMLFCAGIGSDILYWGVIEWAFYYQVPPN
HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCC
GAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLVFVKKQPVYKISQACRPILKG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHCC
QTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIERLTGLDGKNMILRSAILLTITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIGPTVFIMETTVTGFGNMLRDFFHMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHH
TWLEPFGGIKGRKETNFPQDWTIFYWSWWLVYAPFIGLFIARISKGRRLKEVVLGTIIYG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLGCVLFFGIFGNYAVYLQISGQFNVTQYLNTHGTEATIIEVVHHLPFPSLMIVLFLVSA
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
FLFLATTFDSGSYILAAASQKKVVGEPLRANRLFWAFALCLLPFSLMLVGGERALEVLKT
HHHHHHHCCCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ASILASVPLIVIFIFMMISFLIILGRDRIKLETRAEKLKEVERRSLRIVQVSEEEQDDNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKKEKVMDWTTFIGTVAVLLFAVIPMMAFPKASEDIITGINSAISDSIGSIYLFMGLAIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFVMYIAFGKYGNVTLGKASDKPEFNTFTWAAMLFCAGIGSDILYWGVIEWAFYYQVPPN
HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCC
GAKSMSDEALQYATQYGMFHWGPIAWAIYVLPALPIGYLVFVKKQPVYKISQACRPILKG
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHCC
QTDKFVGKVVDILFIFGLLGGAATSLALGVPLISAGIERLTGLDGKNMILRSAILLTITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IFAISSYTGLKKGIQKLSDINVWLSFVLLAFIFIIGPTVFIMETTVTGFGNMLRDFFHMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHH
TWLEPFGGIKGRKETNFPQDWTIFYWSWWLVYAPFIGLFIARISKGRRLKEVVLGTIIYG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLGCVLFFGIFGNYAVYLQISGQFNVTQYLNTHGTEATIIEVVHHLPFPSLMIVLFLVSA
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
FLFLATTFDSGSYILAAASQKKVVGEPLRANRLFWAFALCLLPFSLMLVGGERALEVLKT
HHHHHHHCCCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ASILASVPLIVIFIFMMISFLIILGRDRIKLETRAEKLKEVERRSLRIVQVSEEEQDDNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]