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The map label for this gene is traP [H]

Identifier: 148268306

GI number: 148268306

Start: 2009822

End: 2010325

Strand: Direct

Name: traP [H]

Synonym: SaurJH9_1888

Alternate gene names: 148268306

Gene position: 2009822-2010325 (Clockwise)

Preceding gene: 148268296

Following gene: 148268309

Centisome position: 69.14

GC content: 31.35

Gene sequence:

>504_bases
ATGAAGAAACTATATACATCTTATGGCACTTATGGATTTTTACATCAAATAAAAATCAATAACCCGACCCATCAACTATT
CCAATTTTCAGCATCAGATACTTCAGTTATTTTTGAAGAAACTGATGGTGAGACTGTTTTAAAATCACCTTCAATATATG
AAGTTATTAAAGAAATTGGTGAATTCAGTGAACATCATTTCTATTGTGCAATCTTCATTCCTTCAACAGAAGATCATGCA
TATCAACTTGAAAAGAAACTGATTAGTGTAGACGATAATTTCAGAAACTTTGGTGGCTTTAAAAGCTATCGTTTGTTAAG
ACCTGCTAAAGGTACAACATATAAAATTTATTTCGGATTTGCTGATCGACATGCATACGAAGACTTTAAGCAATCTGATG
CCTTTAATGACCATTTTTCAAAAGACGCATTAAGTCATTTCTTTGGTTCAAGCGGACAACATTCAAGTTATTTTGAAAGA
TATCTATACCCAATAAAAGAATAG

Upstream 100 bases:

>100_bases
TCTCGCAAGATTCATTATAGTAATTTTAATCAATTATTAATAGTGGTAATGACTAGTTTATCATCGTATAATAAATAAAA
ACATAAGGGGGACCTTTCAT

Downstream 100 bases:

>100_bases
ACTCGAAGAAAACTTCCATTGGTTATGCTGTTAACGTATAGATGCTAATGTAATCTGAACGCCGTATCATTTGGCGTTCA
ACATTACATGCACCTTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: Target of RNAIII-activating protein [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHA
YQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHFFGSSGQHSSYFER
YLYPIKE

Sequences:

>Translated_167_residues
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHA
YQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHFFGSSGQHSSYFER
YLYPIKE
>Mature_167_residues
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHA
YQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHFFGSSGQHSSYFER
YLYPIKE

Specific function: Signal transduction protein, which is a major regulator of staphylococcal pathogenesis. Phosphorylated TRAP leads to the activation of agr system and consequent RNAIII synthesis resulting in the expression of several virulence factors. Upregulates the exp

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane. Note=Membrane-associated [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 19532; Mature: 19532

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
CCCEECCCCCCEEEEEEEECCCHHHHEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHH
EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
HHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCEEEEEEEC
ADRHAYEDFKQSDAFNDHFSKDALSHFFGSSGQHSSYFERYLYPIKE
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
CCCEECCCCCCEEEEEEEECCCHHHHEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHH
EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
HHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCEEEEEEEC
ADRHAYEDFKQSDAFNDHFSKDALSHFFGSSGQHSSYFERYLYPIKE
CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA