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The map label for this gene is ccdC [H]

Identifier: 148267833

GI number: 148267833

Start: 1465895

End: 1466362

Strand: Direct

Name: ccdC [H]

Synonym: SaurJH9_1406

Alternate gene names: 148267833

Gene position: 1465895-1466362 (Clockwise)

Preceding gene: 148267832

Following gene: 148267834

Centisome position: 50.43

GC content: 31.2

Gene sequence:

>468_bases
GTGCTCTATTTAATATTTTCAATCATTGTAGCTTTATTTATGGGAACTATAGTTATAGTTATTCGTATGAAAGCTCAAAA
TTATCCGGTAAATGAGAAAAAAATAGTTTTGCCACCGTTTTTTATGGCGACCGGTGCATTGATGTACGTCGTTCCATATT
TTAGGCTAACAGGATCGGAAATGCTAGAAGCCTTTATAATTGGTTTGCTTTTTTCTACAGTTCTAATTTGGACTTCTCGA
TTTGAAGTCAAAGGTACAGAAATTTATATGAAACGATCTAAAGCATTTCCAGTTATTTTGATTTCATTACTTATCATTCG
TACTGTGATGAAAATATTCATTAGTAATGAAATAGATCCTGGAGAATTAGGCGGCATGTTCTTTTTATTAGCATTCTGTA
TGATTGTTCCTTGGAGAGCAGCAATGCTATATAAATACAAAAAACTAAAGAAAACATTAATCAATTAA

Upstream 100 bases:

>100_bases
TTATTAAAATTAAAGTTAACAAAATGACGAATAGACTGAGAAATGCTATAATTCATTTTGTATGATTTACAGAGAGTTTA
TTTAACGAGAAGGTGTCTGC

Downstream 100 bases:

>100_bases
TTACTTTTAAAACCACTTGTGATCGACTTCTAAATCAGTCAATGAGTGGTTTTAATTTTACTTGAAAAGGTGAAATGATT
ATATTAAAATAAAAGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSR
FEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN

Sequences:

>Translated_155_residues
MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSR
FEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
>Mature_155_residues
MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSEMLEAFIIGLLFSTVLIWTSR
FEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 17868; Mature: 17868

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHH
MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCHHH
MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]