| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is 148267496
Identifier: 148267496
GI number: 148267496
Start: 1101503
End: 1102666
Strand: Direct
Name: 148267496
Synonym: SaurJH9_1062
Alternate gene names: NA
Gene position: 1101503-1102666 (Clockwise)
Preceding gene: 148267495
Following gene: 148267497
Centisome position: 37.9
GC content: 32.82
Gene sequence:
>1164_bases ATGCCGACATTATATGAATTAAAACAATCCTTAGGTATGATTGGACAACAATTAAAAAATAAAAATGATGAATTGAGTCA GAAAGCAACAGATCCAAATATTGATATGGAAGACATCAAACAACTAGAAACAGAAAAAGCAGGTTTACAACAAAGATTTA ACATTGTTGAAAGACAAGTGCAAGACATTGAAGAGAAAGAAAAAGCGAAAGTTAAAGATAAAGGAGAAGCTTATCAATCT TTAAGTGATAATGAGAAGATGGTTAAAGCTAAGGCAGAGTTTTATCGTCACGCGATTTTACCAAATGAATTTGAAAAACC TTCAATGGAGGCACAACGTTTATTACACGCTTTACCAACAGGAAATGATTCAGGTGGAGATAAGCTCTTACCAAAAACAC TTTCTAAAGAAATTGTTTCAGAACCATTTGCTAAAAACCAATTACGTGAAAAAGCTCGTCTAACTAACATTAAAGGTTTA GAGATTCCAAGAGTTTCATACACTTTAGACGATGATGATTTCATTACAGACGTAGAAACAGCAAAAGAATTAAAAGCAAA AGGTGATACAGTCAAGTTCACTACTAATAAATTCAAAGTATTTGCTGCAATTTCAGATACTGTAATTCATGGATCAGATG TAGATTTAGTAAACTGGGTTGAAAACGCACTACAATCAGGATTAGCAGCTAAAGAGCGTAAAGATGCCTTAGCAGTAAGT CCTAAATCTGGATTAGAACACATGTCATTTTATAATGGATCTGTTAAAGAAGTTGAGGGAGCAGACATGTATGATGCTAT TATTAACGCTTTAGCAGATTTACATGAAGATTATCGTGATAACGCAACAATTTATATGCGATATGCAGATTATGTCAAAA TTATTAGTGTTCTTTCAAATGGAACAACAAATTTCTTTGACACACCAGCAGAAAAAGTATTTGGCAAACCAGTAGTATTT ACAGATGCAGCAGTTAAACCTATTGTGGGAGATTTCAATTATTTTGGAATTAACTATGATGGAACAACTTATGACACTGA TAAAGATGTTAAAAAAGGCGAATATTTGTTTGTATTAACTGCATGGTATGATCAGCAACGTACATTAGACAGTGCATTCA GAATTGCAAAAGCAAAAGAAAATACAGGTTCATTACCCAGCTAA
Upstream 100 bases:
>100_bases CTAAAGAAAGTATGTCACTAGAAGAAAAAGAAAAAAGAGAAAAAATTAAACGCGAATGCGAAATTTTAAAAATGACAATG AATTATTAGGAGGAAATGAA
Downstream 100 bases:
>100_bases GCCCCAAAAGGTTAATGTAACAGCTAAGGCTAAATCAGCTGTAATATCAGCCGAATAGGGGTGATGAAATGAGTTTAGAA GAAATTAAATTGTGGTTGAG
Product: phage major capsid protein, HK97
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKGEAYQS LSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGL EIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVS PKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVF TDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGSLPS
Sequences:
>Translated_387_residues MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKGEAYQS LSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGL EIPRVSYTLDDDDFITDVETAKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVS PKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVF TDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGSLPS >Mature_386_residues PTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQVQDIEEKEKAKVKDKGEAYQSL SDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPTGNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLE IPRVSYTLDDDDFITDVETAKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVSP KSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSNGTTNFFDTPAEKVFGKPVVFT DAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLTAWYDQQRTLDSAFRIAKAKENTGSLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43491; Mature: 43360
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQV CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC GNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVET CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH AKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVS HHHHHCCCCEEEEECCCEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHCCCEEEC PKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSN CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC GTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLT CCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE AWYDQQRTLDSAFRIAKAKENTGSLPS EECCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PTLYELKQSLGMIGQQLKNKNDELSQKATDPNIDMEDIKQLETEKAGLQQRFNIVERQV CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLLHALPT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC GNDSGGDKLLPKTLSKEIVSEPFAKNQLREKARLTNIKGLEIPRVSYTLDDDDFITDVET CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH AKELKAKGDTVKFTTNKFKVFAAISDTVIHGSDVDLVNWVENALQSGLAAKERKDALAVS HHHHHCCCCEEEEECCCEEEEEEEECCEECCCCCHHHHHHHHHHHHCCHHHHHCCCEEEC PKSGLEHMSFYNGSVKEVEGADMYDAIINALADLHEDYRDNATIYMRYADYVKIISVLSN CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC GTTNFFDTPAEKVFGKPVVFTDAAVKPIVGDFNYFGINYDGTTYDTDKDVKKGEYLFVLT CCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE AWYDQQRTLDSAFRIAKAKENTGSLPS EECCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA