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The map label for this gene is ywqA [H]

Identifier: 148267489

GI number: 148267489

Start: 1095097

End: 1096455

Strand: Direct

Name: ywqA [H]

Synonym: SaurJH9_1055

Alternate gene names: 148267489

Gene position: 1095097-1096455 (Clockwise)

Preceding gene: 148267488

Following gene: 148267490

Centisome position: 37.67

GC content: 32.74

Gene sequence:

>1359_bases
TTGGCGATTGACTTCAAACCACATAGCTATCAAAAGTATGCAATAGATAAAGTGATAGATAATGAGAAATACGGTCTGTT
TTTAGATATGGGTCTAGGGAAAACAGTATCAACACTTACAGCATTTAGTGAATTGCAGTTGTTAGACACTAAAAAAATGT
TAGTTATAGCACCTAAACAAGTTGCTAAAGATACATGGGTTGATGAAGTTGATAAGTGGAACCATTTAAATCATCTGAAA
GTGTCTTTAGTTTTAGGAACACCTAAAGAAAGAAATGATGCATTAAACACAGAGGCTGATATCTATGTAACCAATAAAGA
AAATACTAAATGGTTATGTGATCAATATAAAAAAGAATGGCCATTTGACATGGTTGTGATTGATGAACTGTCTACATTTA
AAAGTCCTAAGAGTCAAAGGTTTAAATCTATTAAAAAGAAATTACCACTCATTAATAGATTTATAGGATTAACAGGAACA
CCTAGTCCAAATAGTTTACAGGATTTATGGGCTCAAGTTTATTTGATAGACAGAGGTGAAAGACTTGAGTCTTCATTCAG
TCGTTATCGAGAAAGGTACTTTAAACCAACTCACCAAGTTAGCGAACATATTTTTAAGTGGGAGCTAAGAGACGGATCTG
AAGAAAAGATATATAAACAAATAGAAGATATATGTTTAAGCATGAAAGCGAAAGATTATCTGGATATGCCTGACAGAGTT
GATACTAAACAAACAGTAGTCTTATCAGAAAAAGAAAGAAAAGTATATGAAGAATTAGAAAAAAACTATATTTTAGAATC
GGAAGAAGAAGGAACAGTTGTAGCTCAAAATGGGGCATCATTAAGTCAGAAACTACTTCAACTATCTAACGGCGCAGTTT
ATACAGATGAGGAAGATGTAAGACTTATACATGATAAGAAGTTAGATAAGTTAGAGGAAATTATAGAGGAGTCTCAAGGC
CAACCAATACTATTGTTTTATAACTTCAAACACGATAAAGAAAGAATACTTCAAAGGTTTAAGGAAGCAACCACATTAGA
GGATTCAAACTATAAAGAACGTTGGAACAGTGGAGACATTAAGTTGCTTATAGCACATCCAGCAAGTGCAGGACATGGAT
TAAACTTACAACAAGGTGGGCACATTATTGTTTGGTTTGGACTTACATGGTCCTTGGAATTATACCAACAAGCAAATGCT
AGATTATACAGACAAGGACAAAATCATACGACTATTATTCATCATATCATGACCGATAACACAATAGATCAAAGAGTATA
TAAAGCTTTACAAAATAAAGAACTAACGCAAGAAGAATTGATGAAAGCTATTAAAGCAAGAATAGCTAAGCATAAGTAA

Upstream 100 bases:

>100_bases
AAATATGTGCATAGACAATTTGAAAATAGAGATCATAAAGTATATGTGTTATGGAATAAAGAACAAGTAAATACTTTTAT
CAGAATGGTAGGTGGAACAT

Downstream 100 bases:

>100_bases
TGGAGGTATAAGATGGGAAAGGCATCATATGATATTAAGCCAGGAACATTTAAATATATTGAATCAGAAATATATAATTT
AAATGAGAACAAGAAAGAGA

Product: SNF2-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLK
VSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGT
PSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRV
DTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQG
QPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANA
RLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK

Sequences:

>Translated_452_residues
MAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLK
VSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGT
PSPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRV
DTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQG
QPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANA
RLYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK
>Mature_451_residues
AIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQVAKDTWVDEVDKWNHLNHLKV
SLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEWPFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTP
SPNSLQDLWAQVYLIDRGERLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRVD
TKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDVRLIHDKKLDKLEEIIEESQGQ
PILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANAR
LYRQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARIAKHK

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR022138
- InterPro:   IPR000330 [H]

Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]

EC number: NA

Molecular weight: Translated: 52771; Mature: 52640

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQ
CCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHH
VAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEW
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC
PFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTPSPNSLQDLWAQVYLIDRGE
CCCEEEECCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHEEEEECCCH
RLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRV
HHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCCCCC
DTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDV
CCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEECCCCH
RLIHDKKLDKLEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDI
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCE
KLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARLYRQGQNHTTIIHHIMTDN
EEEEECCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TIDQRVYKALQNKELTQEELMKAIKARIAKHK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIDFKPHSYQKYAIDKVIDNEKYGLFLDMGLGKTVSTLTAFSELQLLDTKKMLVIAPKQ
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHH
VAKDTWVDEVDKWNHLNHLKVSLVLGTPKERNDALNTEADIYVTNKENTKWLCDQYKKEW
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCC
PFDMVVIDELSTFKSPKSQRFKSIKKKLPLINRFIGLTGTPSPNSLQDLWAQVYLIDRGE
CCCEEEECCHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHEEEEECCCH
RLESSFSRYRERYFKPTHQVSEHIFKWELRDGSEEKIYKQIEDICLSMKAKDYLDMPDRV
HHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCHHHCCCCCCC
DTKQTVVLSEKERKVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDEEDV
CCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEECCCCH
RLIHDKKLDKLEEIIEESQGQPILLFYNFKHDKERILQRFKEATTLEDSNYKERWNSGDI
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCE
KLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQQANARLYRQGQNHTTIIHHIMTDN
EEEEECCCCCCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TIDQRVYKALQNKELTQEELMKAIKARIAKHK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9353933 [H]