Click here to switch to the map view.

The map label for this gene is 148267475

Identifier: 148267475

GI number: 148267475

Start: 1087679

End: 1088080

Strand: Direct

Name: 148267475

Synonym: SaurJH9_1041

Alternate gene names: NA

Gene position: 1087679-1088080 (Clockwise)

Preceding gene: 148267474

Following gene: 148267476

Centisome position: 37.42

GC content: 33.58

Gene sequence:

>402_bases
ATGGCTAGAAGAAAAGTTATAAGAGTTCGTATCAAAGGAAAACTAATGACATTGAGAGAAGTTTCAGAAAAATATCATAT
ATCTCCAGAACTTCTTAGATACAGATACAAACATAAAATGCGCGGCGATGAATTATTGTGTGGAAGAAAAGACTCAAAAT
CTAAAGATGAAGTTGAATATATGAAGAGTCAAATAAAAGATGAAGAAAAAGAGAGAGAAAAAATCAGAAAAAAAGCGATT
TTGAACCTATACCAACGAAATGTGAGAGCGGAATATGAAGAAGAAAGAAAGAGAAGATTGAGACCATGGCTTTATGATGG
AACGCCTCAAAAACATTCACGTGATCCGTACTGGTTCGATGTCACTTATAACCAAATGTTCAAGAAATGGAGTGAAGCTT
AA

Upstream 100 bases:

>100_bases
AAGAAAAAGAGAATTTGGCGGAGTATTTATTTAATAATCCAGGTGAACTATTAAAATATAACGTTATAAATATCAAGGTT
TTAGATTTAGAGGTGGAATG

Downstream 100 bases:

>100_bases
TGAGCATAATCAGTAACAGAAAAGTAGATATGAACAAAACGCAAGACAACGTTAAGCAACCTGCGCATTACACATACGGC
GACATTGAAATTATAGATTT

Product: PVL ORF-50 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAI
LNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA

Sequences:

>Translated_133_residues
MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAI
LNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA
>Mature_132_residues
ARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEYMKSQIKDEEKEREKIRKKAIL
NLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFDVTYNQMFKKWSEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16573; Mature: 16442

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEY
CCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHH
MKSQIKDEEKEREKIRKKAILNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
VTYNQMFKKWSEA
EEHHHHHHHHCCC
>Mature Secondary Structure 
ARRKVIRVRIKGKLMTLREVSEKYHISPELLRYRYKHKMRGDELLCGRKDSKSKDEVEY
CCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHH
MKSQIKDEEKEREKIRKKAILNLYQRNVRAEYEEERKRRLRPWLYDGTPQKHSRDPYWFD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
VTYNQMFKKWSEA
EEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA