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The map label for this gene is pinE [C]

Identifier: 148266494

GI number: 148266494

Start: 58721

End: 60070

Strand: Reverse

Name: pinE [C]

Synonym: SaurJH9_0049

Alternate gene names: 148266494

Gene position: 60070-58721 (Counterclockwise)

Preceding gene: 148266495

Following gene: 148266493

Centisome position: 2.07

GC content: 34.81

Gene sequence:

>1350_bases
ATGAAACAAGTCATAGGCTATTTACGTCAAAGTACGATGAAACAACAATCTCTTGCAGCACAGAAACAGGCTATCGAAGC
AATAGCCGAAAAACATCATATTCAACATATCAACTTTTATAGCGACAAACAATCAGGACGCAAAGATAATCGTAGTGGGT
ATCGACAAATGACGCAATTAATTCAACAAGGGCAATGTGACATATTATGTTGTTATCGTCTTAATAGATTACATCGTAAT
CTGAAAAATGCATTAAAACTCATCAAATTATGTCAAACATACCATGTTCATATCTTAAGCGTACACGATGGTTACTTTGA
TATGGATCAAGCTTTCGACCGATTCAAGCTTAATATTTTTATCAGCTTGGCCGAACTTGAATCAGATAACATTGGAGAAC
AAGTCAGAAATGGGCTTCAAGAAAAAGCAAAGCAAGGTCGATTGATTACAACCCATGCGCCCTTTGGTTACGAATATCAC
AACGGAGCATTCATCATCAATCAAAATGAGTCACCAACGGTAAAGGCTGTATTCAATTATTACATTAAAGGTCATGGTTA
TAAGAAAATTGCACAGTTATTAGAAGAAGATAACACGTATATCAATCGACAACCCTATCAAGTTCGTAACATTATCATCA
ATCCTAATTATTGTGGTCGTGTCAACAATCAATATGGCCAATTCGACAATATGTTTCCTTCTATTGTTTCCACAAGTATA
TATGAGCAAGCGCAGAGACTTCGATCGCAAAAACAAATCAAACAGACATCTTCGGATAACCAACTAAAACAAAAAATCAA
ATGCCCATGTTGTAATACAACACTTACGAATATGACCGTTAGAAAAAAGAATCATACATTACGTTACTACGTCTGTCCTA
AAAACATGAATGCTTCTCGCTTTGTCTGTGATTTTAAAGGCATCAATGCACAAACACTTGAAGATAAAGTATTAGAAGTG
TGCAAAGACTTTTATCAAAATCAACGCATCTACACAAAAATTAAAGGTGCGATTGACAAACGCATCAAAAGACAAAGAAA
CATAGAAAAACATCACACATTGACTCAAGAACAACTGATAGAAAAGTTGGCACAAGGCATCATCGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACGTCAACAACCGCAACGCACTACATCTATCAATGGACATCAAATACAACACACCATTCAA
AATATTATTCAAAAACGTTTCACGTTAAACATATTGTACCCCTATATTGAAACCATTCACATTACGAAAGATAAAAATCT
TATAGGAATCTATTTCAAAAATGAACCACTCAATATCGTCAATCAAACCATGCAATCATCGATTGCATAA

Upstream 100 bases:

>100_bases
AATGAATGACTAATATGAACGCCCAACATCTTATTGATGTTGGGCTTATATATCAATTCATCCATAAATATATATTATTA
CTGTGAAAGGAGGAGCCGAT

Downstream 100 bases:

>100_bases
ACGAAGAAAGGATGAAACATAATGCAACAACTTAAAACAAAACGTGTCGGTATCTATGTACGTGTATCAACAGAAATGCA
AAGCACAGAAGGTTATAGTA

Product: resolvase

Products: NA

Alternate protein names: Resolvase Domain Protein; Site-Specific Recombinase; Recombinase; Resolvase; DNA Recombinase; Cassette Chromosome Recombinase B; Site-Specific DNA Recombinase; Phage Site-Specific Recombinase; Integrase; Site-Specific Recombinase Resolvase Family; Resolvase Domain; Site-Specific Integrase; Site-Specific RecombinaIVCA; Phage Integrase; Cassette Chromosome Recombinase A; Resolvase Family Site-Specific Recombinase; Site-Specific Resolvase Protein; Site-Specific Recombinase For Integration And Excision; DNA Integration/Recombination Protein; LOW QUALITY PROTEIN Resolvase Domain Protein; Site-Specific Integrase/Recombinase Protein; Invertase/Recombinase Like Protein; Site-Specific Recombinase Phage Integrase Family; Serine Recombinase; Site-Specific Recombinases DNA Invertase Pin-Like Protein; Site-Specific Recombinase Resolvase Domain Protein; Prophage; Resolvase-Like Protein; Resolvase Family Protein; Resolvase N-TerminalRecombinase; Recombinase/Resolvase; Cassette Chromosome Recombinase C; Resolvase/Recombinase Domain Protein; DNA Integration/Recombination/Invertion Protein; Site-Specific Recombinase/Resolvase; Conjugative Transposon Recombinase; Gin Phage Site-Specific Recombinase Resolvase; Bacteriophage; Site-Specific Integrase Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Sequences:

>Translated_449_residues
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA
>Mature_449_residues
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRN
LKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYH
NGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEV
CKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52608; Mature: 52608

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCCCCHHHHHHHHHH
IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHEEEEEE
ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY
EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCEEEEECCCCCHHHHHHHH
YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
HHCCCCHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCE
FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI
EEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH
EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHEEEE
ITKDKNLIGIYFKNEPLNIVNQTMQSSIA
EECCCCEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCCCCHHHHHHHHHH
IQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIF
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHEEEEEE
ISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNY
EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCEEEEECCCCCHHHHHHHH
YIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSI
HHCCCCHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
YEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCE
FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLI
EEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHH
EKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIH
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHEEEE
ITKDKNLIGIYFKNEPLNIVNQTMQSSIA
EECCCCEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA