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The map label for this gene is yrkE [H]

Identifier: 148266480

GI number: 148266480

Start: 46075

End: 47139

Strand: Reverse

Name: yrkE [H]

Synonym: SaurJH9_0035

Alternate gene names: 148266480

Gene position: 47139-46075 (Counterclockwise)

Preceding gene: 148266483

Following gene: 148266476

Centisome position: 1.62

GC content: 32.3

Gene sequence:

>1065_bases
ATGGAACAATACAAAGAAGTACACATTAATTCATTAAACAAAGAAGAATTAGAAAAATTGGCAAAAATGGGTCAATTGAT
TGATGTTAGAACAAAAGAAGAATATGAATTAGGACACATTAACGGTTCAACTTTACACCCAGTAGAAGAGATTAAATCAT
TCAATAAGAATAGCAACAAAACGTATTATATACATTGTAAAAGCGGTAACCGAAGCACTAAAGCTTGCGATTATTTAGCC
AAACAAGGTTATGATGTCGTGAATTTAAAGGGTGGATATAAAGATTATGAAGCAAAGAACTTCAATAGTGCTCCTTTAAT
AGAAAAAGATATTGAAATCAAAGAGAATCGTAAACAATTTGATTTTAGAGGTCTTCAGTGCCCTGGACCTATTGTTAATA
TCAGTAAAGAAATTAACAATATTTCAACGGGTGAGCAAATCGAGGTAACAGTTACAGATCCTGGTTTCAATAGTGATATT
AAAAGTTGGGCGAAACAAACAGGGAATACCCTTGTAAATCTTACTGAAGAAGCAAATGTAATTAATGCAATTATTCAAAA
AGAAAAGCCAAAAGAATTTGAAATCAATGACACTGCTACAGGTACAACAATTGTTTTATTTAGCGGTGAGTTAGATAAGG
CAGTAGCAGCAATGATCATCGCAAATGGCGCTAAAGCAGCAGGTAAAGATGTAACTATTTTCTTTACTTTTTGGGGCCTC
AACGCATTAAAAAAAGCGCAATCAACTCGCGTTAAAAAGAAAGGTATTTCCAAAATGTTTGACCTTATGTTACCTAAGGA
TCCAATACATATGCCATTATCAAAAATGAATATGTTTGGACTAGGTAATATTATGATGCGTTATGTAATGAACAAGAAAA
ATGTTGATTCTTTATACTCACTTATCGATCAAGCAATCGATCAAGATATAAAGTTAATTGCTTGTACCATGAGTATGGAT
GTTATGGGAATTTCAAAAGAAGAATTAAGAGATGAAGTCGATTATGGTGGCGTAGGTACTTATATTGGACATACTGAGCA
AGCAAATCATAACTTATTTATCTAA

Upstream 100 bases:

>100_bases
ATAATAAATTAAAACAAAATTGTCAAATACCCATATAGGTATTTGGCAAATGATTCTATCCGTTTTATTATACCCTCATA
GGTATTTATAGGAGGTAAGT

Downstream 100 bases:

>100_bases
TCAATAAAATCTATTTTAAAAAGGAGTTTTTTTTGTTTTTCAAACAATTTTATGAAGACAATTTTTCACAAGCATCTTAT
TTAATTGGATGTCAACGTAC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKNSNKTYYIHCKSGNRSTKACDYLA
KQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKENRKQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDI
KSWAKQTGNTLVNLTEEANVINAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDVTIFFTFWGL
NALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYVMNKKNVDSLYSLIDQAIDQDIKLIACTMSMD
VMGISKEELRDEVDYGGVGTYIGHTEQANHNLFI

Sequences:

>Translated_354_residues
MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKNSNKTYYIHCKSGNRSTKACDYLA
KQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKENRKQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDI
KSWAKQTGNTLVNLTEEANVINAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDVTIFFTFWGL
NALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYVMNKKNVDSLYSLIDQAIDQDIKLIACTMSMD
VMGISKEELRDEVDYGGVGTYIGHTEQANHNLFI
>Mature_354_residues
MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKNSNKTYYIHCKSGNRSTKACDYLA
KQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKENRKQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDI
KSWAKQTGNTLVNLTEEANVINAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDVTIFFTFWGL
NALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYVMNKKNVDSLYSLIDQAIDQDIKLIACTMSMD
VMGISKEELRDEVDYGGVGTYIGHTEQANHNLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 39759; Mature: 39759

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKNSNK
CCCCHHHHCCCCCHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCHHHHHHHCCCCCCE
TYYIHCKSGNRSTKACDYLAKQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKENRKQF
EEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
DFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDIKSWAKQTGNTLVNLTEEANV
CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHH
INAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDVTIFFTFWGL
HHHHHHCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCH
NALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYVMNKKNVDSLYS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LIDQAIDQDIKLIACTMSMDVMGISKEELRDEVDYGGVGTYIGHTEQANHNLFI
HHHHHHCCCCEEEEEEEECCEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEQYKEVHINSLNKEELEKLAKMGQLIDVRTKEEYELGHINGSTLHPVEEIKSFNKNSNK
CCCCHHHHCCCCCHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCHHHHHHHCCCCCCE
TYYIHCKSGNRSTKACDYLAKQGYDVVNLKGGYKDYEAKNFNSAPLIEKDIEIKENRKQF
EEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
DFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDIKSWAKQTGNTLVNLTEEANV
CCCCCCCCCCCEEHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHH
INAIIQKEKPKEFEINDTATGTTIVLFSGELDKAVAAMIIANGAKAAGKDVTIFFTFWGL
HHHHHHCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCH
NALKKAQSTRVKKKGISKMFDLMLPKDPIHMPLSKMNMFGLGNIMMRYVMNKKNVDSLYS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LIDQAIDQDIKLIACTMSMDVMGISKEELRDEVDYGGVGTYIGHTEQANHNLFI
HHHHHHCCCCEEEEEEEECCEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]