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The map label for this gene is rbsC [H]

Identifier: 148261203

GI number: 148261203

Start: 2446312

End: 2447298

Strand: Reverse

Name: rbsC [H]

Synonym: Acry_2213

Alternate gene names: 148261203

Gene position: 2447298-2446312 (Counterclockwise)

Preceding gene: 148261204

Following gene: 148261202

Centisome position: 72.21

GC content: 70.72

Gene sequence:

>987_bases
ATGAGCGGCGCGCCAGCCGCCGGTGCGGGCATCGCGGCACCGGACACCGAACGCCGCGCGCGGATCATCGCGCTGATCCG
GTCGCGCGGCGCCATCGTGGTCCTCGCCATCGCCGCGGTCATCGCCAGCGCGGTCTTCCCGTATTTTGCGACGGTCAACA
ATTTCGAGAATATCGGCGTCGCGGCGAGCTTCGTCGGCCTGGTGACGATCGGCCAGACCTTCGTGATCATTCTCGGCGGG
TTCGACCTGTCGGTCGGCTCGGTCATCGGCCTCGGCTCGGTGCTGGCGGCCTATGCGGTGCCCTATGGCTGGGTGCCCGC
CCTGCTGGTGCCCTGCCTGGCGGGCGCGGCGGTCGGGCTGATCGACGGGCTGCTGATCGCCCGCGCCGGCATGGCGCCGT
TCATCGTCACGCTCGCCGCCCTGCTCGGCGTGCGCGGCCTCGACCTCGTCCTGGCCAGGAGCAGCATGGTCATCGTCCAC
CCCGGCCTGTTCGGCCAGATCGCCAACGGCACGTTGCTCGGGGTCGGCAACCTGATCTGGATCCTGCTCGCCGGCTTCGC
GCTGGCGGCGCTGGTGCTGAACCGGTCGCGCTTCGGCGTCGCCGTGTTCGCGATCGGCGGCAACGAGGAGGCGGCGCGGA
TGCTCGGTGTCCCGGTCGCCACCGTCAAGGTCGCGACTTACGTGCTGTCGGGCACGCTGGCGGGCCTCGCCGGCGCGCTG
CTGGGCGCGCATCTCTCCTCCGGCCTGTCGACGGCGGGGCAGGGCGACGAACTGCGCTCGATCGCCGCCGCCGTCATCGG
CGGGGTGCTGCTGACCGGCGGCGTCGGCACCATGGCCGGCGCCCTCTCGGGCGTGCTGCTGCTCGGCGTCATCGAGAACG
TGATCGACCAGATCGGCAATCTCAGCTCGTATTACCAGAACCTCGCCTCCGGCCTCTTCCTGCTGATGGCCGTCCTGATC
CAGACCGTCCTGACGCGCAGGAGCTGA

Upstream 100 bases:

>100_bases
TGGGAGCGAGCTTCATCATGAACGACATCAATTTCAGCTACGCGCAGATCCTCAAGGCGGCCTTCATCGTCGCCGCGCTG
TACCTGCAGCGGGCCGGCGG

Downstream 100 bases:

>100_bases
CGCCGTCCGCCGGGCGGGTTCGTTGTCTCATGCAAATAAATGACGCGGTTTGATCTAGGTCATATCGGGAGCACACGCGT
CTCCTGTATCAACCGGATGA

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSGAPAAGAGIAAPDTERRARIIALIRSRGAIVVLAIAAVIASAVFPYFATVNNFENIGVAASFVGLVTIGQTFVIILGG
FDLSVGSVIGLGSVLAAYAVPYGWVPALLVPCLAGAAVGLIDGLLIARAGMAPFIVTLAALLGVRGLDLVLARSSMVIVH
PGLFGQIANGTLLGVGNLIWILLAGFALAALVLNRSRFGVAVFAIGGNEEAARMLGVPVATVKVATYVLSGTLAGLAGAL
LGAHLSSGLSTAGQGDELRSIAAAVIGGVLLTGGVGTMAGALSGVLLLGVIENVIDQIGNLSSYYQNLASGLFLLMAVLI
QTVLTRRS

Sequences:

>Translated_328_residues
MSGAPAAGAGIAAPDTERRARIIALIRSRGAIVVLAIAAVIASAVFPYFATVNNFENIGVAASFVGLVTIGQTFVIILGG
FDLSVGSVIGLGSVLAAYAVPYGWVPALLVPCLAGAAVGLIDGLLIARAGMAPFIVTLAALLGVRGLDLVLARSSMVIVH
PGLFGQIANGTLLGVGNLIWILLAGFALAALVLNRSRFGVAVFAIGGNEEAARMLGVPVATVKVATYVLSGTLAGLAGAL
LGAHLSSGLSTAGQGDELRSIAAAVIGGVLLTGGVGTMAGALSGVLLLGVIENVIDQIGNLSSYYQNLASGLFLLMAVLI
QTVLTRRS
>Mature_327_residues
SGAPAAGAGIAAPDTERRARIIALIRSRGAIVVLAIAAVIASAVFPYFATVNNFENIGVAASFVGLVTIGQTFVIILGGF
DLSVGSVIGLGSVLAAYAVPYGWVPALLVPCLAGAAVGLIDGLLIARAGMAPFIVTLAALLGVRGLDLVLARSSMVIVHP
GLFGQIANGTLLGVGNLIWILLAGFALAALVLNRSRFGVAVFAIGGNEEAARMLGVPVATVKVATYVLSGTLAGLAGALL
GAHLSSGLSTAGQGDELRSIAAAVIGGVLLTGGVGTMAGALSGVLLLGVIENVIDQIGNLSSYYQNLASGLFLLMAVLIQ
TVLTRRS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=289, Percent_Identity=38.0622837370242, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI145693152, Length=326, Percent_Identity=36.1963190184049, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1790191, Length=311, Percent_Identity=36.9774919614148, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1788896, Length=306, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790524, Length=322, Percent_Identity=31.055900621118, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1789992, Length=135, Percent_Identity=38.5185185185185, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787793, Length=282, Percent_Identity=29.0780141843972, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788471, Length=277, Percent_Identity=33.2129963898917, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI145693214, Length=216, Percent_Identity=33.7962962962963, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32780; Mature: 32649

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAPAAGAGIAAPDTERRARIIALIRSRGAIVVLAIAAVIASAVFPYFATVNNFENIGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCH
AASFVGLVTIGQTFVIILGGFDLSVGSVIGLGSVLAAYAVPYGWVPALLVPCLAGAAVGL
HHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IDGLLIARAGMAPFIVTLAALLGVRGLDLVLARSSMVIVHPGLFGQIANGTLLGVGNLIW
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCHHHHCCCEEEHHHHHHH
ILLAGFALAALVLNRSRFGVAVFAIGGNEEAARMLGVPVATVKVATYVLSGTLAGLAGAL
HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGAHLSSGLSTAGQGDELRSIAAAVIGGVLLTGGVGTMAGALSGVLLLGVIENVIDQIGN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LSSYYQNLASGLFLLMAVLIQTVLTRRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGAPAAGAGIAAPDTERRARIIALIRSRGAIVVLAIAAVIASAVFPYFATVNNFENIGV
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCH
AASFVGLVTIGQTFVIILGGFDLSVGSVIGLGSVLAAYAVPYGWVPALLVPCLAGAAVGL
HHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IDGLLIARAGMAPFIVTLAALLGVRGLDLVLARSSMVIVHPGLFGQIANGTLLGVGNLIW
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCHHHHCCCEEEHHHHHHH
ILLAGFALAALVLNRSRFGVAVFAIGGNEEAARMLGVPVATVKVATYVLSGTLAGLAGAL
HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGAHLSSGLSTAGQGDELRSIAAAVIGGVLLTGGVGTMAGALSGVLLLGVIENVIDQIGN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LSSYYQNLASGLFLLMAVLIQTVLTRRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]