| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is cutS [H]
Identifier: 148261165
GI number: 148261165
Start: 2400519
End: 2401004
Strand: Reverse
Name: cutS [H]
Synonym: Acry_2175
Alternate gene names: 148261165
Gene position: 2401004-2400519 (Counterclockwise)
Preceding gene: 148261166
Following gene: 148261164
Centisome position: 70.84
GC content: 70.78
Gene sequence:
>486_bases ATGTCTGGCTCCATGACGGCGATTTCCCTGATCGTGAATGGCGAGCGCGTCGAGGCCGAGGTGCCGGCCCGGCTGCATCT GGCGGATTTCCTGCGCGAGCGGCTCGGCCTGACCGGCACGCATCTCGGCTGCGAGCATGGCGTGTGCGGCGCCTGCACGG TGCGGCTGGACGGGGCGATCGTGCGCGGCTGCCTCGTCCTCGCGGTGCAGGCGGCGGGGTGCGTGGTCGAGACCATCGAG GGGGTGTCGGATTCGGGCGAGCTGGCGGATTTGCAGGAGGCGTTCTGGCGCCGCAACGCGCTGCAATGCGGCTATTGCAC GCCGGGGATGATGCTGGCGGCGGCGGATTTCCTCGCCCATGCGCCCGACCCGACCGACCGCGCGGCGATCCGCGCGCATC TTTCGGGCAATTACTGCCGCTGCACCGGATATGAGGCGATCGTCGACGCGGTCGAGGCGACGGCGCGGGCGCGGAGGGCG GCATGA
Upstream 100 bases:
>100_bases CGGCACTCGCCGGGGATTTGCCGCCGCATGCGGACCCGGAGATTTCGGCGCCGGTGCGGCTGCACCTGGCGCGGGTGCTG CTGCGGCGGGTGATGAAGGA
Downstream 100 bases:
>100_bases ACGGCGCCGACCGGCCGATCGGACGGGCGATGGCGCGGCCGGATGCGCGGCGGCTGACCCAGGGGCGCGGGCTGTTCGCC AGCGATATCGCGCTGCCGCG
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSGSMTAISLIVNGERVEAEVPARLHLADFLRERLGLTGTHLGCEHGVCGACTVRLDGAIVRGCLVLAVQAAGCVVETIE GVSDSGELADLQEAFWRRNALQCGYCTPGMMLAAADFLAHAPDPTDRAAIRAHLSGNYCRCTGYEAIVDAVEATARARRA A
Sequences:
>Translated_161_residues MSGSMTAISLIVNGERVEAEVPARLHLADFLRERLGLTGTHLGCEHGVCGACTVRLDGAIVRGCLVLAVQAAGCVVETIE GVSDSGELADLQEAFWRRNALQCGYCTPGMMLAAADFLAHAPDPTDRAAIRAHLSGNYCRCTGYEAIVDAVEATARARRA A >Mature_160_residues SGSMTAISLIVNGERVEAEVPARLHLADFLRERLGLTGTHLGCEHGVCGACTVRLDGAIVRGCLVLAVQAAGCVVETIEG VSDSGELADLQEAFWRRNALQCGYCTPGMMLAAADFLAHAPDPTDRAAIRAHLSGNYCRCTGYEAIVDAVEATARARRAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=166, Percent_Identity=38.5542168674699, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI71773480, Length=151, Percent_Identity=36.4238410596026, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786480, Length=165, Percent_Identity=38.7878787878788, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1789232, Length=145, Percent_Identity=40.6896551724138, Blast_Score=108, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32566215, Length=158, Percent_Identity=41.1392405063291, Blast_Score=116, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=40.7643312101911, Blast_Score=114, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17540638, Length=161, Percent_Identity=38.5093167701863, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI17737937, Length=165, Percent_Identity=36.969696969697, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24647193, Length=170, Percent_Identity=33.5294117647059, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24647199, Length=140, Percent_Identity=32.8571428571429, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI24647201, Length=157, Percent_Identity=29.2993630573248, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=7e-14, Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 16960; Mature: 16828
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSMTAISLIVNGERVEAEVPARLHLADFLRERLGLTGTHLGCEHGVCGACTVRLDGAI CCCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHH VRGCLVLAVQAAGCVVETIEGVSDSGELADLQEAFWRRNALQCGYCTPGMMLAAADFLAH HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC APDPTDRAAIRAHLSGNYCRCTGYEAIVDAVEATARARRAA CCCCCCHHHEEHCCCCCEEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGSMTAISLIVNGERVEAEVPARLHLADFLRERLGLTGTHLGCEHGVCGACTVRLDGAI CCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHH VRGCLVLAVQAAGCVVETIEGVSDSGELADLQEAFWRRNALQCGYCTPGMMLAAADFLAH HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC APDPTDRAAIRAHLSGNYCRCTGYEAIVDAVEATARARRAA CCCCCCHHHEEHCCCCCEEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]