| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148261123
Identifier: 148261123
GI number: 148261123
Start: 2356588
End: 2356890
Strand: Reverse
Name: 148261123
Synonym: Acry_2132
Alternate gene names: NA
Gene position: 2356890-2356588 (Counterclockwise)
Preceding gene: 148261124
Following gene: 148261122
Centisome position: 69.54
GC content: 58.09
Gene sequence:
>303_bases ATGTCCGGAACGATCTCGGCTCTCGTAAATCCGTCCAATGCAATCTCTGCCTATGGTCGCGCTGCCGGCACGGGCGCGGC CGGTTCGCCCAGCTTTGGCGATTACATGTCGAACGTCATCACGAGCGCAATTCATCAGAGCGCGTCGACGGAGCAGGCAG CCAGTTCCGGTTTGATGGGAAAGGGAGACCTTACCCATGTCGTTGCCTCTGTTGCCCAGGCTCAGGTTGCGTTGCAGACG ACCGTTGCCATCCGTGATCGTCTGATCCAGGCCTATCAATCGATCATGAGCATGCCGATCTGA
Upstream 100 bases:
>100_bases AACTCATGGACATGCAGCAGGCCGAGCGTTCCTACGATGCCAATCTCTCCGTCATGAATGCCACGCGCGGCATGATGACC CGCACGCTGGGGCTGATCTG
Downstream 100 bases:
>100_bases TCATGGGCGGTGGTGCTTCAGCGACGATTGGCAGACAAAAGGAGCGGCGGTCCGGCATCGCTTGCGGTTCCCGGCATGAC TGATCCAGCGGTCATCACGT
Product: flagellar hook-basal body complex protein FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMGKGDLTHVVASVAQAQVALQT TVAIRDRLIQAYQSIMSMPI
Sequences:
>Translated_100_residues MSGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMGKGDLTHVVASVAQAQVALQT TVAIRDRLIQAYQSIMSMPI >Mature_99_residues SGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMGKGDLTHVVASVAQAQVALQTT VAIRDRLIQAYQSIMSMPI
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10087; Mature: 9956
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMG CCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC KGDLTHVVASVAQAQVALQTTVAIRDRLIQAYQSIMSMPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGTISALVNPSNAISAYGRAAGTGAAGSPSFGDYMSNVITSAIHQSASTEQAASSGLMG CCCHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC KGDLTHVVASVAQAQVALQTTVAIRDRLIQAYQSIMSMPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA