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The map label for this gene is fliR [H]

Identifier: 148261121

GI number: 148261121

Start: 2355464

End: 2356243

Strand: Reverse

Name: fliR [H]

Synonym: Acry_2130

Alternate gene names: 148261121

Gene position: 2356243-2355464 (Counterclockwise)

Preceding gene: 148261122

Following gene: 148261120

Centisome position: 69.52

GC content: 59.74

Gene sequence:

>780_bases
ATGTTTCCGCACGGCCTTGCCGATATGGTTTTCGGGCCGTTGCTGATTTTCATCAGAATTTCGAGTCTAGTCATGGCGCT
GCCCTTCATGGGGGCGGGGAATGCGCCGCCGCAGATACGCATCGGGCTGTCGATCGCTCTTACGGCAATCGTGGCGCCGT
TGATCGTCTCCGGTACGATTGGCGTTCCATCCTCGATTCCGGTTTTCGTGTTTCTGGTTCTTCGTGAGATCGTTGTCGGG
CTATCTCTCGGCTGGCTCACGGCGGCGATCATGCTGAGCCTGCCCGTAGCGGGACAGATTATTTCCTATCAGATGGGCCT
GTCCAGCGTGTTGCTGCCGAATGTCGAGATTGGTCCGAACAGCACGCTGGTGGCGAATGCCCTGAGCGTCATGTTGCCGG
CTGTAGTGTTCACCACCGGTCTTTTTATGTTGCCGGTCCTCGCCATAATCCGGTCGTTCCGGGTAATCCCGCTGACGTCG
ACAATCATTGGCGCTCACCTTCCCCCGGCGGGGCTGCTGCTCGGCTTCGCTGTCCGGGCCGTGTCGGCAGAGTTCGTGAC
GGCCTTGCATCTTGCCGCGCCCTTTCTCTTCATCGGTCTCCTGTGGCAAGCCGGTCTTGGACTGATGTCCAAGGTCGCCC
CGAGCATGCAGGTTTATTTCGTTGCCGCCCCGCTGCAGCTGCTTGGCGGCATGTTTCTGCTCGCGATCCTCGCCTCCCCG
ATGCTCACTGTCTGGCAGGATGCGATGCTGCCGCTTCTGCATGCTTACGCGAGCTGGTGA

Upstream 100 bases:

>100_bases
CCGTCGCCGGAACATTGATGATCATGGGCAGTTTTTTGCTCGGTACGTTATCGCAGTTCGCGCACGAGATATTCACCGCC
ATGATTCACGTCGGCTGATC

Downstream 100 bases:

>100_bases
GATGCAGGCCGGAATCCGTGATATCGCATGAGGTCGTGTCATAGCGGCTGAAGACAAGGAAGATCGGACCGAAGCTGCGA
CGCCAACGCGCCTTGCGAAG

Product: type III secretion system inner membrane R protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MFPHGLADMVFGPLLIFIRISSLVMALPFMGAGNAPPQIRIGLSIALTAIVAPLIVSGTIGVPSSIPVFVFLVLREIVVG
LSLGWLTAAIMLSLPVAGQIISYQMGLSSVLLPNVEIGPNSTLVANALSVMLPAVVFTTGLFMLPVLAIIRSFRVIPLTS
TIIGAHLPPAGLLLGFAVRAVSAEFVTALHLAAPFLFIGLLWQAGLGLMSKVAPSMQVYFVAAPLQLLGGMFLLAILASP
MLTVWQDAMLPLLHAYASW

Sequences:

>Translated_259_residues
MFPHGLADMVFGPLLIFIRISSLVMALPFMGAGNAPPQIRIGLSIALTAIVAPLIVSGTIGVPSSIPVFVFLVLREIVVG
LSLGWLTAAIMLSLPVAGQIISYQMGLSSVLLPNVEIGPNSTLVANALSVMLPAVVFTTGLFMLPVLAIIRSFRVIPLTS
TIIGAHLPPAGLLLGFAVRAVSAEFVTALHLAAPFLFIGLLWQAGLGLMSKVAPSMQVYFVAAPLQLLGGMFLLAILASP
MLTVWQDAMLPLLHAYASW
>Mature_259_residues
MFPHGLADMVFGPLLIFIRISSLVMALPFMGAGNAPPQIRIGLSIALTAIVAPLIVSGTIGVPSSIPVFVFLVLREIVVG
LSLGWLTAAIMLSLPVAGQIISYQMGLSSVLLPNVEIGPNSTLVANALSVMLPAVVFTTGLFMLPVLAIIRSFRVIPLTS
TIIGAHLPPAGLLLGFAVRAVSAEFVTALHLAAPFLFIGLLWQAGLGLMSKVAPSMQVYFVAAPLQLLGGMFLLAILASP
MLTVWQDAMLPLLHAYASW

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27217; Mature: 27217

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]