| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261085
Identifier: 148261085
GI number: 148261085
Start: 2306806
End: 2308746
Strand: Reverse
Name: 148261085
Synonym: Acry_2094
Alternate gene names: NA
Gene position: 2308746-2306806 (Counterclockwise)
Preceding gene: 148261090
Following gene: 148261084
Centisome position: 68.12
GC content: 61.31
Gene sequence:
>1941_bases ATGACGACTAATATCGATCTGCTTGACCTCCAGACATCGCTTGGTAGCGGCGTCCTGACGCTGGTCGGGGTCAATGGCCA GGCGGCGCTCAGCCAGTGCTTCCGGTATACGCTGTCGGTGCGCGCGGGTGCCGGCGGGCTCGATCCGAACGATCTTCTAT ACACGTCGGTCACCGTCGCGATCGGGTCCGACGGGACGAACCAGACCTACATCAATGGCCTCGTCTCGTCCGTGGTCCAG AAGCCCGGCAACGCGGCCGGTACCGCGATCGCCGCCGGCCTCGAACTCTGGGATCATGAACTGACGGTCGTTCCCGCCCT CTGGTTCCTCGGGCAGACACTCGATTGCCGGATATTCCAGAACAAGACCGCCGTTGCCATCGTCAAGGAAGTTCTGGACG AATTCGAGATTACTTCATACGAGCTGCCGAGTGGCGGGACGAGCTATGACTATACAGTCATGTTCAATGAGACCTATCTG GACTTCATAAATCGCATCCTCGCGCGCGATGGGCTTTTCTATTATTTCGTCCACGAAAAGTCCGGACACAAGTTCGTCGT CGCCAGCAGCTCGCAATCTCTCCCCAAGTTGGGAGCCGTCAAATTCGCCGGGCAGACCGCGACCGAAGTCGGGGTTCATA CGCTCAGCCGCGCCGACAGCACGACCATCGGCAAGTTCATCGGGAACGACTACAACTATGAAACGGCATCCACCGGCCTC GTCTCCGATGCGGATACCGTGCTCAAGGCGAAGGGGGCGGCAACCCGCAAATTCTATCGCTACCCGTCGGAAAATCCCGT CAAGGAGGCGATCGGACAGCAGGTGCGCCATCAGAACGAGGCGGCCGAGGTTCGTGCCGGGTTGTTCGCCGGTGGCGGCA ACACCCCGTCGATGCTCGCTCCCGGCAACGCCGTCACCATCACCGGCGATCCCTTCGGCATCGGCGATTACGTCATTGCG GCGGCCGCGCTCAGCGTGACCGATCACGCCGGCATCGGCGGAGGGACGGCCACCGTCGATGTCGCATTCACCCTGTTCGA CGCATCCGTTCCCTGGCGGCCGGAACTCCTGCCGAAGCCGCAGATCGCCGGCTTGCAGTCCGCCCTCGTCGTCGGGCCCT CGGGCGATGAAATTTACACGAACAAGTACGGCCGGGTGAAGGTTCAGTTCAACTGGGACACGCGCGGCAAGAAGGACGAG AACTCGAGTTGCTGGGTTCGCGTGATCCAGCCCTGGGCCGGCGCCGGCTGGGGGTTCCAGTTCCTTCCGCGCATCGGCCA GGAGGTCGCCATCAGCTTCCTCGAGAGCGACATCGACCGGCCGGTCGTGATCGGTTCCTTCTACAACTCCGGCCAGGTCA GCCTGTTCAATCTCCCCGCCGAGCAGAACAAGGCGGGATTCCGCTCCCGCTCAACCAAGAGTGGCGGGACGTCGAACTAC AGCGAATTCAGTATCGACGATACCAAGGGTTCGGAGGTTGTCCTGCTGCATGCGGAGCGGGATTATACGGTCGAGGTCGA GCATGATGAAACCCGCACGATCGGCAACAACCGCACGGTGACCGTCAAGAAGGACGAGGCGATCACCGTGGACGGCAACC AGACCGAGACGGTGAAAGGAAATCGTACCTTCGAGGTCAAGCAGGACCATTCCGAGACGGTCGATGGCAACCAGTCCGTC ACGGTCAAGGGCAAGCAGAGCGTGTCGGTGCAGGGGCAGCAATCCGTATCCGTGACCGGGGCCGTCACCTATGAGTCGAT GGAGTCGATCACGCTGAAAGTGGGCGGAAACAGCATCAAGATCGACATGACGGGCATCACGCTCTCCGGCACCCTCATCA AGATCAATGCCCAGGCCGAGCTGTCGACGAGCGGCGCGATTGCGCAGCATTCCGGCTCGGGGATGCTGAAACTCCAGGGC GGGATCATCATGGTGAACTGA
Upstream 100 bases:
>100_bases CGGCGCGCCGGCTTGCGGTGCTATGATGTATCGGGCTGGCGTTGCTGCGCGGGCGCGGAACGGCGCCGCCCGGGGCAAAT CGTGATCGGGGGTTGGCGGA
Downstream 100 bases:
>100_bases GGTGGATGCACGGAAGATGGACAAGATACAGGCAGCCGTGCGTGAGACCGTACTCGCCCATGCAGCCCTTGGCGAGGAAG CGCTGGCGGCTGCCGGCGGC
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; Vgr Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MTTNIDLLDLQTSLGSGVLTLVGVNGQAALSQCFRYTLSVRAGAGGLDPNDLLYTSVTVAIGSDGTNQTYINGLVSSVVQ KPGNAAGTAIAAGLELWDHELTVVPALWFLGQTLDCRIFQNKTAVAIVKEVLDEFEITSYELPSGGTSYDYTVMFNETYL DFINRILARDGLFYYFVHEKSGHKFVVASSSQSLPKLGAVKFAGQTATEVGVHTLSRADSTTIGKFIGNDYNYETASTGL VSDADTVLKAKGAATRKFYRYPSENPVKEAIGQQVRHQNEAAEVRAGLFAGGGNTPSMLAPGNAVTITGDPFGIGDYVIA AAALSVTDHAGIGGGTATVDVAFTLFDASVPWRPELLPKPQIAGLQSALVVGPSGDEIYTNKYGRVKVQFNWDTRGKKDE NSSCWVRVIQPWAGAGWGFQFLPRIGQEVAISFLESDIDRPVVIGSFYNSGQVSLFNLPAEQNKAGFRSRSTKSGGTSNY SEFSIDDTKGSEVVLLHAERDYTVEVEHDETRTIGNNRTVTVKKDEAITVDGNQTETVKGNRTFEVKQDHSETVDGNQSV TVKGKQSVSVQGQQSVSVTGAVTYESMESITLKVGGNSIKIDMTGITLSGTLIKINAQAELSTSGAIAQHSGSGMLKLQG GIIMVN
Sequences:
>Translated_646_residues MTTNIDLLDLQTSLGSGVLTLVGVNGQAALSQCFRYTLSVRAGAGGLDPNDLLYTSVTVAIGSDGTNQTYINGLVSSVVQ KPGNAAGTAIAAGLELWDHELTVVPALWFLGQTLDCRIFQNKTAVAIVKEVLDEFEITSYELPSGGTSYDYTVMFNETYL DFINRILARDGLFYYFVHEKSGHKFVVASSSQSLPKLGAVKFAGQTATEVGVHTLSRADSTTIGKFIGNDYNYETASTGL VSDADTVLKAKGAATRKFYRYPSENPVKEAIGQQVRHQNEAAEVRAGLFAGGGNTPSMLAPGNAVTITGDPFGIGDYVIA AAALSVTDHAGIGGGTATVDVAFTLFDASVPWRPELLPKPQIAGLQSALVVGPSGDEIYTNKYGRVKVQFNWDTRGKKDE NSSCWVRVIQPWAGAGWGFQFLPRIGQEVAISFLESDIDRPVVIGSFYNSGQVSLFNLPAEQNKAGFRSRSTKSGGTSNY SEFSIDDTKGSEVVLLHAERDYTVEVEHDETRTIGNNRTVTVKKDEAITVDGNQTETVKGNRTFEVKQDHSETVDGNQSV TVKGKQSVSVQGQQSVSVTGAVTYESMESITLKVGGNSIKIDMTGITLSGTLIKINAQAELSTSGAIAQHSGSGMLKLQG GIIMVN >Mature_645_residues TTNIDLLDLQTSLGSGVLTLVGVNGQAALSQCFRYTLSVRAGAGGLDPNDLLYTSVTVAIGSDGTNQTYINGLVSSVVQK PGNAAGTAIAAGLELWDHELTVVPALWFLGQTLDCRIFQNKTAVAIVKEVLDEFEITSYELPSGGTSYDYTVMFNETYLD FINRILARDGLFYYFVHEKSGHKFVVASSSQSLPKLGAVKFAGQTATEVGVHTLSRADSTTIGKFIGNDYNYETASTGLV SDADTVLKAKGAATRKFYRYPSENPVKEAIGQQVRHQNEAAEVRAGLFAGGGNTPSMLAPGNAVTITGDPFGIGDYVIAA AALSVTDHAGIGGGTATVDVAFTLFDASVPWRPELLPKPQIAGLQSALVVGPSGDEIYTNKYGRVKVQFNWDTRGKKDEN SSCWVRVIQPWAGAGWGFQFLPRIGQEVAISFLESDIDRPVVIGSFYNSGQVSLFNLPAEQNKAGFRSRSTKSGGTSNYS EFSIDDTKGSEVVLLHAERDYTVEVEHDETRTIGNNRTVTVKKDEAITVDGNQTETVKGNRTFEVKQDHSETVDGNQSVT VKGKQSVSVQGQQSVSVTGAVTYESMESITLKVGGNSIKIDMTGITLSGTLIKINAQAELSTSGAIAQHSGSGMLKLQGG IIMVN
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68939; Mature: 68808
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNIDLLDLQTSLGSGVLTLVGVNGQAALSQCFRYTLSVRAGAGGLDPNDLLYTSVTVA CCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEEE IGSDGTNQTYINGLVSSVVQKPGNAAGTAIAAGLELWDHELTVVPALWFLGQTLDCRIFQ ECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHCCCEEEEEEC NKTAVAIVKEVLDEFEITSYELPSGGTSYDYTVMFNETYLDFINRILARDGLFYYFVHEK CCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEC SGHKFVVASSSQSLPKLGAVKFAGQTATEVGVHTLSRADSTTIGKFIGNDYNYETASTGL CCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC VSDADTVLKAKGAATRKFYRYPSENPVKEAIGQQVRHQNEAAEVRAGLFAGGGNTPSMLA CCCCHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCEEC PGNAVTITGDPFGIGDYVIAAAALSVTDHAGIGGGTATVDVAFTLFDASVPWRPELLPKP CCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCC QIAGLQSALVVGPSGDEIYTNKYGRVKVQFNWDTRGKKDENSSCWVRVIQPWAGAGWGFQ CCCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHH FLPRIGQEVAISFLESDIDRPVVIGSFYNSGQVSLFNLPAEQNKAGFRSRSTKSGGTSNY HHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC SEFSIDDTKGSEVVLLHAERDYTVEVEHDETRTIGNNRTVTVKKDEAITVDGNQTETVKG CEEEECCCCCCEEEEEECCCCEEEEEECCCCEECCCCEEEEEECCCEEEECCCCEEEECC NRTFEVKQDHSETVDGNQSVTVKGKQSVSVQGQQSVSVTGAVTYESMESITLKVGGNSIK CEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEEEEECCEEEEEEECCCEEE IDMTGITLSGTLIKINAQAELSTSGAIAQHSGSGMLKLQGGIIMVN EEEEEEEEEEEEEEEECCEEECCCCCEEECCCCCEEEEECCEEEEC >Mature Secondary Structure TTNIDLLDLQTSLGSGVLTLVGVNGQAALSQCFRYTLSVRAGAGGLDPNDLLYTSVTVA CCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEEE IGSDGTNQTYINGLVSSVVQKPGNAAGTAIAAGLELWDHELTVVPALWFLGQTLDCRIFQ ECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHCCCEEEEEEC NKTAVAIVKEVLDEFEITSYELPSGGTSYDYTVMFNETYLDFINRILARDGLFYYFVHEK CCHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEC SGHKFVVASSSQSLPKLGAVKFAGQTATEVGVHTLSRADSTTIGKFIGNDYNYETASTGL CCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC VSDADTVLKAKGAATRKFYRYPSENPVKEAIGQQVRHQNEAAEVRAGLFAGGGNTPSMLA CCCCHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCEEC PGNAVTITGDPFGIGDYVIAAAALSVTDHAGIGGGTATVDVAFTLFDASVPWRPELLPKP CCCEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCC QIAGLQSALVVGPSGDEIYTNKYGRVKVQFNWDTRGKKDENSSCWVRVIQPWAGAGWGFQ CCCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHH FLPRIGQEVAISFLESDIDRPVVIGSFYNSGQVSLFNLPAEQNKAGFRSRSTKSGGTSNY HHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC SEFSIDDTKGSEVVLLHAERDYTVEVEHDETRTIGNNRTVTVKKDEAITVDGNQTETVKG CEEEECCCCCCEEEEEECCCCEEEEEECCCCEECCCCEEEEEECCCEEEECCCCEEEECC NRTFEVKQDHSETVDGNQSVTVKGKQSVSVQGQQSVSVTGAVTYESMESITLKVGGNSIK CEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEEEEEECCEEEEEEECCCEEE IDMTGITLSGTLIKINAQAELSTSGAIAQHSGSGMLKLQGGIIMVN EEEEEEEEEEEEEEEECCEEECCCCCEEECCCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA