Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148261045

Identifier: 148261045

GI number: 148261045

Start: 2257102

End: 2257611

Strand: Reverse

Name: 148261045

Synonym: Acry_2053

Alternate gene names: NA

Gene position: 2257611-2257102 (Counterclockwise)

Preceding gene: 148261047

Following gene: 148261044

Centisome position: 66.61

GC content: 77.65

Gene sequence:

>510_bases
TTGCCCGACCCGCTCGGCGCGATCGCCCGCCTGCCGCCGGGACTCTCCGGCGTGGTGCTGCGCGACGATGCGGCGCCGGA
CCGGGCGGCACTCGCGGCGGCGGTGGCGAAGCTCTGCCGGCGCCGGCGAATCGCCCTCGTGGTCGCCGGCGATGCCCGGC
TGGCGGCCCGTCTGCACGCCGGGCTGCACCTGCGGCGGGGCAGGGTTGCGCCGGGCCGCAAGCCGGGTCTGGTGACCGCC
TCGGCGCATGGCCGGCAGGAGCTGGTGCGCGCGCGCCGGGCCGGCGCCGGGCTGGTGTTTCTCTCGCCGGCCTTCCCGAC
GGCGAGCCATCCTGGGGCGCCCGCCCTCGGGCCGGTGCGCTGGGCGGCGCTGGCGCGGCTGGCCGGCGGGGTTCAGGTGG
TGGCCCTTGGCGGCATCGAGGGGCGGCGGATGCGGGCGCTTGGCCCGGCCTGCCGCGGTGTTGCGGCGATCGGGGCTTTG
TCAAATCAGTGTCATACAGTGTGGCGTTGA

Upstream 100 bases:

>100_bases
TTCGCTCATGGATGAACAACTGATCGCGGCGGCGCGGGCGGTCAAGCGGCGCCATCGCTGCCGCCACCCCACGCTCTGGC
TGTTCACCGATCGGGCCCGA

Downstream 100 bases:

>100_bases
TACCACAGCGCAGCCAAATAGCCTTCACCGGCGCTTTCGGATGTTGCTTCCTGAGACTGAAATGCCTTTTATCCGCCTGT
CTGACGCCTCGCCGCGACGG

Product: thiamine monophosphate synthase

Products: diphosphate; thiamine monophosphate

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTA
SAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGAL
SNQCHTVWR

Sequences:

>Translated_169_residues
MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTA
SAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGAL
SNQCHTVWR
>Mature_168_residues
PDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTAS
AHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALS
NQCHTVWR

Specific function: Unknown

COG id: COG0352

COG function: function code H; Thiamine monophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.3

Molecular weight: Translated: 17354; Mature: 17222

Theoretical pI: Translated: 12.57; Mature: 12.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHA
CCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHH
GLHLRRGRVAPGRKPGLVTASAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVR
CEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHH
WAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALSNQCHTVWR
HHHHHHHCCCEEEEEECCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHA
CCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHH
GLHLRRGRVAPGRKPGLVTASAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVR
CEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHH
WAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALSNQCHTVWR
HHHHHHHCCCEEEEEECCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate; 4-Methyl-5-(2-phosphono-oxyethyl)-thiazole

Specific reaction: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine monophosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA