| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261045
Identifier: 148261045
GI number: 148261045
Start: 2257102
End: 2257611
Strand: Reverse
Name: 148261045
Synonym: Acry_2053
Alternate gene names: NA
Gene position: 2257611-2257102 (Counterclockwise)
Preceding gene: 148261047
Following gene: 148261044
Centisome position: 66.61
GC content: 77.65
Gene sequence:
>510_bases TTGCCCGACCCGCTCGGCGCGATCGCCCGCCTGCCGCCGGGACTCTCCGGCGTGGTGCTGCGCGACGATGCGGCGCCGGA CCGGGCGGCACTCGCGGCGGCGGTGGCGAAGCTCTGCCGGCGCCGGCGAATCGCCCTCGTGGTCGCCGGCGATGCCCGGC TGGCGGCCCGTCTGCACGCCGGGCTGCACCTGCGGCGGGGCAGGGTTGCGCCGGGCCGCAAGCCGGGTCTGGTGACCGCC TCGGCGCATGGCCGGCAGGAGCTGGTGCGCGCGCGCCGGGCCGGCGCCGGGCTGGTGTTTCTCTCGCCGGCCTTCCCGAC GGCGAGCCATCCTGGGGCGCCCGCCCTCGGGCCGGTGCGCTGGGCGGCGCTGGCGCGGCTGGCCGGCGGGGTTCAGGTGG TGGCCCTTGGCGGCATCGAGGGGCGGCGGATGCGGGCGCTTGGCCCGGCCTGCCGCGGTGTTGCGGCGATCGGGGCTTTG TCAAATCAGTGTCATACAGTGTGGCGTTGA
Upstream 100 bases:
>100_bases TTCGCTCATGGATGAACAACTGATCGCGGCGGCGCGGGCGGTCAAGCGGCGCCATCGCTGCCGCCACCCCACGCTCTGGC TGTTCACCGATCGGGCCCGA
Downstream 100 bases:
>100_bases TACCACAGCGCAGCCAAATAGCCTTCACCGGCGCTTTCGGATGTTGCTTCCTGAGACTGAAATGCCTTTTATCCGCCTGT CTGACGCCTCGCCGCGACGG
Product: thiamine monophosphate synthase
Products: diphosphate; thiamine monophosphate
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTA SAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGAL SNQCHTVWR
Sequences:
>Translated_169_residues MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTA SAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGAL SNQCHTVWR >Mature_168_residues PDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHAGLHLRRGRVAPGRKPGLVTAS AHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVRWAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALS NQCHTVWR
Specific function: Unknown
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.3
Molecular weight: Translated: 17354; Mature: 17222
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHA CCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHH GLHLRRGRVAPGRKPGLVTASAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVR CEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHH WAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALSNQCHTVWR HHHHHHHCCCEEEEEECCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDPLGAIARLPPGLSGVVLRDDAAPDRAALAAAVAKLCRRRRIALVVAGDARLAARLHA CCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHH GLHLRRGRVAPGRKPGLVTASAHGRQELVRARRAGAGLVFLSPAFPTASHPGAPALGPVR CEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHH WAALARLAGGVQVVALGGIEGRRMRALGPACRGVAAIGALSNQCHTVWR HHHHHHHCCCEEEEEECCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate; 4-Methyl-5-(2-phosphono-oxyethyl)-thiazole
Specific reaction: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine monophosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA