| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260989
Identifier: 148260989
GI number: 148260989
Start: 2189792
End: 2190898
Strand: Reverse
Name: 148260989
Synonym: Acry_1997
Alternate gene names: NA
Gene position: 2190898-2189792 (Counterclockwise)
Preceding gene: 148260990
Following gene: 148260988
Centisome position: 64.64
GC content: 62.51
Gene sequence:
>1107_bases ATGATGCAACTCGTCCGCGACGGGCGCGACCTCAGGGTCGATTTCTTCCGCGGCATCGCGCTGTTCTGCATCTTTCTCGA CCATATCCCGCACGACACACTGGCCCGCTTCACCGTGCGCAACCTCGCACTGAACGACGCGACGGAAATCTTCATCCTGC TTGCCGGCTTTGCCGCCGCCCTTGTCTATGGCCGCAAAATGGATCGCGCGGGGCCACTTTCCGCCTCGGCCGACATGCTC AAGCGCGCCTGGACGCTCTATATCGCGCATATTTTCCTCTTCGTGCTGTTCGCAGCGCAGGTGGCGCTTGCGGCCATCTG GTTCGCGCGGCCGCAATACATTTCCGGGGTGGGAATCGATCATCTGGTTGCGAAGCCGCTTTCGGCAATCATCGAGGCCG TGCCGCTGCTCTACCAGCCGGCCTATCTGAATGTCCTGCCGCTCTATGTCGCCATCATGGGCGGCATCGCGCCGCTGCTC TTCATGCTGCGCTTTCCGCGCGCACTGCTCGTGCTCAGTTTCGCGCTCTATGCCGGCGCACGGATCTATGGCTGGAACCT GCCGACCCACAGTGGCCACGGCTGGTACTTCAACCCGTTCACCTGGCAGTTGCTCTTCGTCCTCGGCATGCTGTTCTCGC GCTATGGCAAGCCGGATTTGCCCGTTCTCGCGACCGATGCGGTTGCGGTCGTGCTGCTGCTGATCGGCTTCGCGATCCTG CTGACCACATGGATCGAGCCGTCCCTCGCGAAGCACATCCCGCCACTGCTCAAGCCATTCGTGAGCAATATCGACAAAAC CGGCCTGCATCCGTACCGGCTGGCCTCCATTCTCTCGCTTGCCTGGCTCGCCTCCCGCCATGTCCGCGCCGAAGGACGGT TTCTGAGCAGCCGCCTCGCCCGCGTCTTCGTCCTGATCGGCCAGTACGGCTTGCCAACCTATTGCGCGAGTATCCTGCTC TCCTATGCCGGGCGCATCGTGATGGACACCGATGACGGCTGGGCGATGCAGATCGTCGTCAATCTCACCGGTCTCGCCGC GCTGCTCGGCGTCGCCGCGATCGCCGCCTGGTACAGGGTGAAAGATGCCAAACCGTCTGTTTCCTAG
Upstream 100 bases:
>100_bases GCGTTACCCGGCTTGCCCAGGGCGTTCCCGTCGGCGGCAGTATCGAAATCCTCGACGAGGGCACACTCGCCCTCGCGCTT TCCGCCCGCCGCGCTGCCGG
Downstream 100 bases:
>100_bases TCTCCTGCTGCTTTTCGCATTGGCCGGGACGGCGGCGGCCGCGCCGTCCTGCCCGACCGTGCCGGTGCAATATCTGCGTC TGCCGCATCTGCGGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Transmembrane Protein OpgC
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MMQLVRDGRDLRVDFFRGIALFCIFLDHIPHDTLARFTVRNLALNDATEIFILLAGFAAALVYGRKMDRAGPLSASADML KRAWTLYIAHIFLFVLFAAQVALAAIWFARPQYISGVGIDHLVAKPLSAIIEAVPLLYQPAYLNVLPLYVAIMGGIAPLL FMLRFPRALLVLSFALYAGARIYGWNLPTHSGHGWYFNPFTWQLLFVLGMLFSRYGKPDLPVLATDAVAVVLLLIGFAIL LTTWIEPSLAKHIPPLLKPFVSNIDKTGLHPYRLASILSLAWLASRHVRAEGRFLSSRLARVFVLIGQYGLPTYCASILL SYAGRIVMDTDDGWAMQIVVNLTGLAALLGVAAIAAWYRVKDAKPSVS
Sequences:
>Translated_368_residues MMQLVRDGRDLRVDFFRGIALFCIFLDHIPHDTLARFTVRNLALNDATEIFILLAGFAAALVYGRKMDRAGPLSASADML KRAWTLYIAHIFLFVLFAAQVALAAIWFARPQYISGVGIDHLVAKPLSAIIEAVPLLYQPAYLNVLPLYVAIMGGIAPLL FMLRFPRALLVLSFALYAGARIYGWNLPTHSGHGWYFNPFTWQLLFVLGMLFSRYGKPDLPVLATDAVAVVLLLIGFAIL LTTWIEPSLAKHIPPLLKPFVSNIDKTGLHPYRLASILSLAWLASRHVRAEGRFLSSRLARVFVLIGQYGLPTYCASILL SYAGRIVMDTDDGWAMQIVVNLTGLAALLGVAAIAAWYRVKDAKPSVS >Mature_368_residues MMQLVRDGRDLRVDFFRGIALFCIFLDHIPHDTLARFTVRNLALNDATEIFILLAGFAAALVYGRKMDRAGPLSASADML KRAWTLYIAHIFLFVLFAAQVALAAIWFARPQYISGVGIDHLVAKPLSAIIEAVPLLYQPAYLNVLPLYVAIMGGIAPLL FMLRFPRALLVLSFALYAGARIYGWNLPTHSGHGWYFNPFTWQLLFVLGMLFSRYGKPDLPVLATDAVAVVLLLIGFAIL LTTWIEPSLAKHIPPLLKPFVSNIDKTGLHPYRLASILSLAWLASRHVRAEGRFLSSRLARVFVLIGQYGLPTYCASILL SYAGRIVMDTDDGWAMQIVVNLTGLAALLGVAAIAAWYRVKDAKPSVS
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40729; Mature: 40729
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLVRDGRDLRVDFFRGIALFCIFLDHIPHDTLARFTVRNLALNDATEIFILLAGFAAA CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVYGRKMDRAGPLSASADMLKRAWTLYIAHIFLFVLFAAQVALAAIWFARPQYISGVGID HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHH HLVAKPLSAIIEAVPLLYQPAYLNVLPLYVAIMGGIAPLLFMLRFPRALLVLSFALYAGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIYGWNLPTHSGHGWYFNPFTWQLLFVLGMLFSRYGKPDLPVLATDAVAVVLLLIGFAIL EEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH LTTWIEPSLAKHIPPLLKPFVSNIDKTGLHPYRLASILSLAWLASRHVRAEGRFLSSRLA HHHHCCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFVLIGQYGLPTYCASILLSYAGRIVMDTDDGWAMQIVVNLTGLAALLGVAAIAAWYRV HHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH KDAKPSVS CCCCCCCC >Mature Secondary Structure MMQLVRDGRDLRVDFFRGIALFCIFLDHIPHDTLARFTVRNLALNDATEIFILLAGFAAA CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVYGRKMDRAGPLSASADMLKRAWTLYIAHIFLFVLFAAQVALAAIWFARPQYISGVGID HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHH HLVAKPLSAIIEAVPLLYQPAYLNVLPLYVAIMGGIAPLLFMLRFPRALLVLSFALYAGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIYGWNLPTHSGHGWYFNPFTWQLLFVLGMLFSRYGKPDLPVLATDAVAVVLLLIGFAIL EEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH LTTWIEPSLAKHIPPLLKPFVSNIDKTGLHPYRLASILSLAWLASRHVRAEGRFLSSRLA HHHHCCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFVLIGQYGLPTYCASILLSYAGRIVMDTDDGWAMQIVVNLTGLAALLGVAAIAAWYRV HHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH KDAKPSVS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA