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The map label for this gene is xylH [H]

Identifier: 148260964

GI number: 148260964

Start: 2162024

End: 2163232

Strand: Reverse

Name: xylH [H]

Synonym: Acry_1971

Alternate gene names: 148260964

Gene position: 2163232-2162024 (Counterclockwise)

Preceding gene: 148260965

Following gene: 148260961

Centisome position: 63.83

GC content: 67.16

Gene sequence:

>1209_bases
ATGAGCAGCGTGCAGCATCCGGAGCAGAAATCCGAGCAGAAGTCCCCGTTCAGGCGCTGGCTGACCGGGGTCGCGCAATC
GACCGATCTCGGCATGCTGCCGGTGATCGCGGCACTCATCGTCATCTGGATCGTGTTCGAGACGCTGAACGCCAACTTCC
TGACCCCGCGCAACCTCTCCAATCTCGCGGCCCAGATCGTCGTCACCGGCACGCTGGCGCTGGCCGAAATCTACATCATC
CTGCTCGGCATGATCGACCTGTCGATCGGCTGGAACTCGGTTCTCGCCGCGTCGGTGTTCTCGCTGGCCACGGTGTTCTT
TCACCTGCCGGTCGGCGTCGGCATCGTGCTTGGAATCGCGCTGGCGACCGGCCTTGGTTTCCTCCAGGGCATGGTGGTCT
CGCGGATCGGCGTGCCGAGCTTCGTCGTCACCCTCGGCGGCGGCATGATCGCCGAGGGCCTGACGCTCGCGATCCTGACG
CCGCATGGCGGATCGGTGCCGCTGGCGGACAATTTCACCACCGCGATCGGCACGCTCAATCTCGATCCGCTGTGGTCGTG
GGTGCTGAGCCTGCTGCTGTTCGGCGCCTATGCCGCGGTCACGCTGAACGGCATCCGCAAGCGCACGGCGAGCGGCCACG
AGGGCGGGTTCGCCGCGACGATGCGGCTGGTCGGCGTCGCCATCATGCTGTTCGGCGCGGTGTTCATGCTGAACGCCTAT
CGCGGCGTGCCGTTCCTGCTCATGATCTTCCTGATCGCGCTGTTCGCCTCGGCCTTCGTCACCAAGTCCACCCGCTTCGG
CCGGCATCTCTACGCGGTCGGCGGCAATGCCGAGGCGGCGCGCCGCGCCGGCATCTCGGTGAAGGGGATTCAGCTCGCCG
TCTTCATCATCGCCGGCTTCCTTGTCGGCCTCGCCGGCTATCTCGATGCGGCGCGCCTCGGCGTCGCCTCCGCCTCGGTC
GGCAATGGCGACATCATGCTCAACGCCGTCGCCGCGGCGGTGATCGGCGGCACCTCGCTGTTCGGCGGGCGCGGCAGCGT
CTATGGCGCGCTGTTCGGCGCGCTGGTGATCGCGAGTGTCAGCAACGGCATGAACCTGCTCGGCGCCGCTTCATCGGTGC
GCTTCATCGTCGAGGGGCTGATCCTGCTGGCCGCGATCACCATCGACACCATCCTCCGCCTCCGGCGGATGCGCAGCGGC
CGGGCCTAA

Upstream 100 bases:

>100_bases
TGATGGAAGCCCGCAAGAGCGACGTGACGCCGGAGCAGGTGGTCGGCGCCATCACCGGCACGCTCGCCATTCCCGGGACC
GGCGCGGCAGGAGCCATGGC

Downstream 100 bases:

>100_bases
CGCCCGGCTGCCACGCCAGCCGCGGGAAGGCCGCCGCCATGTTGCGCATTCATGGCGGCGGCTGCCTCGGCGGCGGCCAG
CGCGCCCTCGAGATAGCCGC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSSVQHPEQKSEQKSPFRRWLTGVAQSTDLGMLPVIAALIVIWIVFETLNANFLTPRNLSNLAAQIVVTGTLALAEIYII
LLGMIDLSIGWNSVLAASVFSLATVFFHLPVGVGIVLGIALATGLGFLQGMVVSRIGVPSFVVTLGGGMIAEGLTLAILT
PHGGSVPLADNFTTAIGTLNLDPLWSWVLSLLLFGAYAAVTLNGIRKRTASGHEGGFAATMRLVGVAIMLFGAVFMLNAY
RGVPFLLMIFLIALFASAFVTKSTRFGRHLYAVGGNAEAARRAGISVKGIQLAVFIIAGFLVGLAGYLDAARLGVASASV
GNGDIMLNAVAAAVIGGTSLFGGRGSVYGALFGALVIASVSNGMNLLGAASSVRFIVEGLILLAAITIDTILRLRRMRSG
RA

Sequences:

>Translated_402_residues
MSSVQHPEQKSEQKSPFRRWLTGVAQSTDLGMLPVIAALIVIWIVFETLNANFLTPRNLSNLAAQIVVTGTLALAEIYII
LLGMIDLSIGWNSVLAASVFSLATVFFHLPVGVGIVLGIALATGLGFLQGMVVSRIGVPSFVVTLGGGMIAEGLTLAILT
PHGGSVPLADNFTTAIGTLNLDPLWSWVLSLLLFGAYAAVTLNGIRKRTASGHEGGFAATMRLVGVAIMLFGAVFMLNAY
RGVPFLLMIFLIALFASAFVTKSTRFGRHLYAVGGNAEAARRAGISVKGIQLAVFIIAGFLVGLAGYLDAARLGVASASV
GNGDIMLNAVAAAVIGGTSLFGGRGSVYGALFGALVIASVSNGMNLLGAASSVRFIVEGLILLAAITIDTILRLRRMRSG
RA
>Mature_401_residues
SSVQHPEQKSEQKSPFRRWLTGVAQSTDLGMLPVIAALIVIWIVFETLNANFLTPRNLSNLAAQIVVTGTLALAEIYIIL
LGMIDLSIGWNSVLAASVFSLATVFFHLPVGVGIVLGIALATGLGFLQGMVVSRIGVPSFVVTLGGGMIAEGLTLAILTP
HGGSVPLADNFTTAIGTLNLDPLWSWVLSLLLFGAYAAVTLNGIRKRTASGHEGGFAATMRLVGVAIMLFGAVFMLNAYR
GVPFLLMIFLIALFASAFVTKSTRFGRHLYAVGGNAEAARRAGISVKGIQLAVFIIAGFLVGLAGYLDAARLGVASASVG
NGDIMLNAVAAAVIGGTSLFGGRGSVYGALFGALVIASVSNGMNLLGAASSVRFIVEGLILLAAITIDTILRLRRMRSGR
A

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=375, Percent_Identity=37.0666666666667, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1788896, Length=164, Percent_Identity=42.6829268292683, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1790191, Length=149, Percent_Identity=42.2818791946309, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1790524, Length=151, Percent_Identity=39.7350993377483, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI145693152, Length=395, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082395, Length=348, Percent_Identity=25.2873563218391, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787793, Length=161, Percent_Identity=34.1614906832298, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41805; Mature: 41674

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVQHPEQKSEQKSPFRRWLTGVAQSTDLGMLPVIAALIVIWIVFETLNANFLTPRNLS
CCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
NLAAQIVVTGTLALAEIYIILLGMIDLSIGWNSVLAASVFSLATVFFHLPVGVGIVLGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATGLGFLQGMVVSRIGVPSFVVTLGGGMIAEGLTLAILTPHGGSVPLADNFTTAIGTLN
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCC
LDPLWSWVLSLLLFGAYAAVTLNGIRKRTASGHEGGFAATMRLVGVAIMLFGAVFMLNAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGVPFLLMIFLIALFASAFVTKSTRFGRHLYAVGGNAEAARRAGISVKGIQLAVFIIAGF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH
LVGLAGYLDAARLGVASASVGNGDIMLNAVAAAVIGGTSLFGGRGSVYGALFGALVIASV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SNGMNLLGAASSVRFIVEGLILLAAITIDTILRLRRMRSGRA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSVQHPEQKSEQKSPFRRWLTGVAQSTDLGMLPVIAALIVIWIVFETLNANFLTPRNLS
CCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
NLAAQIVVTGTLALAEIYIILLGMIDLSIGWNSVLAASVFSLATVFFHLPVGVGIVLGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATGLGFLQGMVVSRIGVPSFVVTLGGGMIAEGLTLAILTPHGGSVPLADNFTTAIGTLN
HHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCC
LDPLWSWVLSLLLFGAYAAVTLNGIRKRTASGHEGGFAATMRLVGVAIMLFGAVFMLNAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGVPFLLMIFLIALFASAFVTKSTRFGRHLYAVGGNAEAARRAGISVKGIQLAVFIIAGF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHH
LVGLAGYLDAARLGVASASVGNGDIMLNAVAAAVIGGTSLFGGRGSVYGALFGALVIASV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SNGMNLLGAASSVRFIVEGLILLAAITIDTILRLRRMRSGRA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]