| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260898
Identifier: 148260898
GI number: 148260898
Start: 2103619
End: 2104104
Strand: Reverse
Name: 148260898
Synonym: Acry_1905
Alternate gene names: NA
Gene position: 2104104-2103619 (Counterclockwise)
Preceding gene: 148260899
Following gene: 148260897
Centisome position: 62.08
GC content: 70.16
Gene sequence:
>486_bases ATGATCAAGGTGGGCGACAGGCTCCCGGCCATGAAGCTGATGACCCCCGGCGCCGAGGGACCGCAGGAGATCGACACCGG CGAACTGTTCGCCGGCAAGACGGTGGTGCTCTTCGCCGTTCCCGGCGCCTTCACCCCCACCTGCAGCGCGAAGCACGTTC CCGGCTTCCTCGAGCATTACGACGCGCTGAAGGCGAAGGGTGTCGACGAGATCGCCTGCATCGCGGTGAACGACGTGTTC GTGATGACCGCCTGGGCCGAGAGCCAGAAGGCCGGCGGCAAGGTCACCTTCCTCGCCGACGGCTCCGGCGCCTTCACCCG CGCCCTCGGCCTCGAGCTCGACCTCATCGCCCGCGGCCTCGGCGTCCGCAGCCAGCGCTATGCCCTGGTCGCGCAGGACG GGCTGGTGACGCACCTCGCCATCGAGCAACCGGGCGGCTTCGAGGTCAGCCGGGCCGAGGCGGTGCTGGAGGCGCTCGGC GGCTGA
Upstream 100 bases:
>100_bases CTGGGCCGAGGAACGCTACGCCTGAACCGCCCGCCTTCACGCGCGGCCCGGCTTCGGCTACCAGTCTGCTCGAACAGGCC ATCCAATCAGGAGAGACGCG
Downstream 100 bases:
>100_bases GCCTGCCCGCGTGACGGCCTGCCGCAGCCCGGTCCTCAGCGTCGTCGTTCCCTGCTATCGCGAGCAGCCGAACGTCGCCC CCATGGTCGCCGCCCTCGAT
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIKVGDRLPAMKLMTPGAEGPQEIDTGELFAGKTVVLFAVPGAFTPTCSAKHVPGFLEHYDALKAKGVDEIACIAVNDVF VMTAWAESQKAGGKVTFLADGSGAFTRALGLELDLIARGLGVRSQRYALVAQDGLVTHLAIEQPGGFEVSRAEAVLEALG G
Sequences:
>Translated_161_residues MIKVGDRLPAMKLMTPGAEGPQEIDTGELFAGKTVVLFAVPGAFTPTCSAKHVPGFLEHYDALKAKGVDEIACIAVNDVF VMTAWAESQKAGGKVTFLADGSGAFTRALGLELDLIARGLGVRSQRYALVAQDGLVTHLAIEQPGGFEVSRAEAVLEALG G >Mature_161_residues MIKVGDRLPAMKLMTPGAEGPQEIDTGELFAGKTVVLFAVPGAFTPTCSAKHVPGFLEHYDALKAKGVDEIACIAVNDVF VMTAWAESQKAGGKVTFLADGSGAFTRALGLELDLIARGLGVRSQRYALVAQDGLVTHLAIEQPGGFEVSRAEAVLEALG G
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=161, Percent_Identity=45.9627329192547, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323138, Length=146, Percent_Identity=37.6712328767123, Blast_Score=90, Evalue=1e-19, Organism=Drosophila melanogaster, GI78706776, Length=158, Percent_Identity=50, Blast_Score=150, Evalue=4e-37, Organism=Drosophila melanogaster, GI78709078, Length=158, Percent_Identity=50, Blast_Score=150, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16800; Mature: 16800
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVGDRLPAMKLMTPGAEGPQEIDTGELFAGKTVVLFAVPGAFTPTCSAKHVPGFLEHY CCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH DALKAKGVDEIACIAVNDVFVMTAWAESQKAGGKVTFLADGSGAFTRALGLELDLIARGL HHHHHCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCEEHHHCCCHHHHHHCC GVRSQRYALVAQDGLVTHLAIEQPGGFEVSRAEAVLEALGG CCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIKVGDRLPAMKLMTPGAEGPQEIDTGELFAGKTVVLFAVPGAFTPTCSAKHVPGFLEHY CCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH DALKAKGVDEIACIAVNDVFVMTAWAESQKAGGKVTFLADGSGAFTRALGLELDLIARGL HHHHHCCCCEEEEEEECCEEEEEEECCCCCCCCEEEEEECCCCCEEHHHCCCHHHHHHCC GVRSQRYALVAQDGLVTHLAIEQPGGFEVSRAEAVLEALGG CCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]