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The map label for this gene is pcaH [H]

Identifier: 148260843

GI number: 148260843

Start: 2038873

End: 2039577

Strand: Reverse

Name: pcaH [H]

Synonym: Acry_1849

Alternate gene names: 148260843

Gene position: 2039577-2038873 (Counterclockwise)

Preceding gene: 148260844

Following gene: 148260842

Centisome position: 60.18

GC content: 71.06

Gene sequence:

>705_bases
ATGAACGAGACCGAAGCCGACGGGATCGCGCCGTCGCGCAGCGCGCAGCCGCCGCTCTCGGCGCCGGATTATCGCAGCAC
GGCGCTGCGCGCGCCGCGCGAGATGCCGGTGGCGATTCCGCAGACGCTGACCGAGACGACCGGGCCGGTCTTCGAGCCGT
CGCGCTTCGCGCCGACCGACAATCTCGCCGTGAATGACGGGCACGAGGCGATGGGCGAGCGGATCATCGTCACCGGGCGG
GTGCTGGACGAGGCCGGGCGGCCGGTGCCGCGCAGCATGGTCGAGATCTGGCAGGCGAATGCCGCGGGGCGCTACAACCA
CAAGGGCGATACGCATGACGCGCCGCTCGACCCGCATTTCCGCGGCGCCGGGCGCGTGTTCACCGATGACGAGGGGCGCT
ACCGCTTCGTTACGGTCAAGCCGGGCGCCTATCCCTGGGGGAACCACGCCAATGCGTGGCGGCCGAATCACATCCATTTC
TCGCTGTTCGGCGCCGGGTTCGCCGCGCGCCTGATCACGCAGATGTATTTCCCCGGCGACCCGTTGCTTGAACTCGACCC
GATCTTCCACGCGGTGCCGGACGCGGCGGCGCGGGCGCGGCTGGTGGCGGCGTTCGATATCGGCGTCACCGAGCCGGGGC
GGGCGCTCGGCTATCGGTTCGACATCGTGCTGCGCGGCCGCGCCGCCACGCCGATGGAGGGGTGA

Upstream 100 bases:

>100_bases
AGCACGCCGAGCTGGAGTATTATACGCAGTCGGAGGCGGGGCAGACCGCGCTGGCCGAGAATTATGTCGGCCTGCCCTTC
GCCGCGCCGGAGGGGGTGCC

Downstream 100 bases:

>100_bases
GGGATGGAGATGTCGGCGCAGCAGACGATCGGGCCGTTCTGGCACCTGATCGACCAGCCGGACTGGTGGGACCTGACGCG
GTTCGGCGCCGCCGGCGCGC

Product: protocatechuate 3,4-dioxygenase subunit beta

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNETEADGIAPSRSAQPPLSAPDYRSTALRAPREMPVAIPQTLTETTGPVFEPSRFAPTDNLAVNDGHEAMGERIIVTGR
VLDEAGRPVPRSMVEIWQANAAGRYNHKGDTHDAPLDPHFRGAGRVFTDDEGRYRFVTVKPGAYPWGNHANAWRPNHIHF
SLFGAGFAARLITQMYFPGDPLLELDPIFHAVPDAAARARLVAAFDIGVTEPGRALGYRFDIVLRGRAATPMEG

Sequences:

>Translated_234_residues
MNETEADGIAPSRSAQPPLSAPDYRSTALRAPREMPVAIPQTLTETTGPVFEPSRFAPTDNLAVNDGHEAMGERIIVTGR
VLDEAGRPVPRSMVEIWQANAAGRYNHKGDTHDAPLDPHFRGAGRVFTDDEGRYRFVTVKPGAYPWGNHANAWRPNHIHF
SLFGAGFAARLITQMYFPGDPLLELDPIFHAVPDAAARARLVAAFDIGVTEPGRALGYRFDIVLRGRAATPMEG
>Mature_234_residues
MNETEADGIAPSRSAQPPLSAPDYRSTALRAPREMPVAIPQTLTETTGPVFEPSRFAPTDNLAVNDGHEAMGERIIVTGR
VLDEAGRPVPRSMVEIWQANAAGRYNHKGDTHDAPLDPHFRGAGRVFTDDEGRYRFVTVKPGAYPWGNHANAWRPNHIHF
SLFGAGFAARLITQMYFPGDPLLELDPIFHAVPDAAARARLVAAFDIGVTEPGRALGYRFDIVLRGRAATPMEG

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 25564; Mature: 25564

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETEADGIAPSRSAQPPLSAPDYRSTALRAPREMPVAIPQTLTETTGPVFEPSRFAPTD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCHHHHHCCCCCCCCCCCCCCC
NLAVNDGHEAMGERIIVTGRVLDEAGRPVPRSMVEIWQANAAGRYNHKGDTHDAPLDPHF
CEEECCCHHHHCCEEEEEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RGAGRVFTDDEGRYRFVTVKPGAYPWGNHANAWRPNHIHFSLFGAGFAARLITQMYFPGD
CCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCC
PLLELDPIFHAVPDAAARARLVAAFDIGVTEPGRALGYRFDIVLRGRAATPMEG
CCEEECHHHHHCCCHHHHEEEEEEEECCCCCCCHHHCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNETEADGIAPSRSAQPPLSAPDYRSTALRAPREMPVAIPQTLTETTGPVFEPSRFAPTD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCHHHHHCCCCCCCCCCCCCCC
NLAVNDGHEAMGERIIVTGRVLDEAGRPVPRSMVEIWQANAAGRYNHKGDTHDAPLDPHF
CEEECCCHHHHCCEEEEEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RGAGRVFTDDEGRYRFVTVKPGAYPWGNHANAWRPNHIHFSLFGAGFAARLITQMYFPGD
CCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCC
PLLELDPIFHAVPDAAARARLVAAFDIGVTEPGRALGYRFDIVLRGRAATPMEG
CCEEECHHHHHCCCHHHHEEEEEEEECCCCCCCHHHCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]