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The map label for this gene is ygcJ [H]

Identifier: 148260805

GI number: 148260805

Start: 1993693

End: 1994805

Strand: Reverse

Name: ygcJ [H]

Synonym: Acry_1811

Alternate gene names: 148260805

Gene position: 1994805-1993693 (Counterclockwise)

Preceding gene: 148260806

Following gene: 148260804

Centisome position: 58.86

GC content: 63.43

Gene sequence:

>1113_bases
ATGACCCAGTTTTTGCAGGTCCATCTCCTGACCTTCTTCCCGCCTTCGAACATGAACCGCGATGACACTGGGCGCCCGAA
AACCGCCATGGTCGGCGGGGCAATGCGCCTTCGCCTGTCCTCCCAGGCGCTCAAGCGCGCCTGGCGCACGTCCACGATAT
TTTCCGAGGCCCTCAAGGGGTACATGGGAGAGCGCACGCAGCGCCTTGGGGAGGAGATTCTCAAAGCCCTGCGCGCCGAG
GGGGTTTCCGAGGCCCAGGCGCTCGCCATCGCCCGCGCCGTCGCTGGCCAGTTCGGCAAGCTCAACGAAGACGAGACACC
GGCGCGCATCCAGCAGCTTGCGTTTATTTCGCCCGATGAGCGCAAGGCTGCCTTCGACTTGGCCCGGCGATATGCCGCCG
GTGAGATTCCTCTTCCCGAAAAGGCCAAGGGCAAGAGGGGCAAGGCGAATAAGGTCGAGAGTGAGGAAGAGGTGGAAGCG
CCCGAAATCCTGCTGCTCCGCGAAAGCGATACCGCAGCTGACATTGCCCTCTTCGGCCGCATGCTGGCCGACAAGCCGGC
CTTCAACCGTGAAGCCGCCGCACAGGTGGCACATGCCATCACCACCCATCGCATCAGCGTGGACGACGACTATTACACGG
CTGTCGATGATCTGAAGCGACCGTCCGAGGACGCCGGCGCTGGGTTCATCGGAGAGACCGGCTTCGGCAGTGGCGTCTTC
TACACATACATGTCGATCAATATCGACCTCCTGATCCGGAACCTGGGCGGCGGTGATCAGGCACGAGACCTGGCTGCCAC
CGCCATTGCTGCTCTTGTCGAGGCGGCAGCCACCACCGCACCGAGCGGCAAGCAGAACAGCTTCGCCGCCCACGGGCGGG
CCGGATACATCCTCGCCGAGCGCGGAAAGGCGCAGCCGCGAACTCTTGCGGGTGCCTTCGCCAAACCCGTCGAAGGGGGC
GATATCATGGACGCATCGATTGGCCGGCTCGAGGAATTCCGGGAAGCGATCGACAAGGCTTACGGGCCGACGGCCGATGC
GACAAAGGTCATGCGTGTTGGTGGCGAGGGCTCTCTGGCTGACATCATTGTCTTCGCCCGCGAAGGAGTGTGA

Upstream 100 bases:

>100_bases
ACTGGTCGGAAACCCGCCGCCGCCGCTGGGTGTTCGATTACTGGAACGCAAGCGAAATCGCCTCCACCCCTACAACCGAT
GCCCCCGAGGAGCCCGTGTG

Downstream 100 bases:

>100_bases
GGTGAAGAGCTTCCTCACTTTCACCCTTTTTGCCCCCATCGCCTCTTTTGGCGCTATTGCCGTGGGGGAGCGGCGCGAGA
GCTGGTCGCGCCCCGCACGA

Product: CRISPR-associated Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTQFLQVHLLTFFPPSNMNRDDTGRPKTAMVGGAMRLRLSSQALKRAWRTSTIFSEALKGYMGERTQRLGEEILKALRAE
GVSEAQALAIARAVAGQFGKLNEDETPARIQQLAFISPDERKAAFDLARRYAAGEIPLPEKAKGKRGKANKVESEEEVEA
PEILLLRESDTAADIALFGRMLADKPAFNREAAAQVAHAITTHRISVDDDYYTAVDDLKRPSEDAGAGFIGETGFGSGVF
YTYMSINIDLLIRNLGGGDQARDLAATAIAALVEAAATTAPSGKQNSFAAHGRAGYILAERGKAQPRTLAGAFAKPVEGG
DIMDASIGRLEEFREAIDKAYGPTADATKVMRVGGEGSLADIIVFAREGV

Sequences:

>Translated_370_residues
MTQFLQVHLLTFFPPSNMNRDDTGRPKTAMVGGAMRLRLSSQALKRAWRTSTIFSEALKGYMGERTQRLGEEILKALRAE
GVSEAQALAIARAVAGQFGKLNEDETPARIQQLAFISPDERKAAFDLARRYAAGEIPLPEKAKGKRGKANKVESEEEVEA
PEILLLRESDTAADIALFGRMLADKPAFNREAAAQVAHAITTHRISVDDDYYTAVDDLKRPSEDAGAGFIGETGFGSGVF
YTYMSINIDLLIRNLGGGDQARDLAATAIAALVEAAATTAPSGKQNSFAAHGRAGYILAERGKAQPRTLAGAFAKPVEGG
DIMDASIGRLEEFREAIDKAYGPTADATKVMRVGGEGSLADIIVFAREGV
>Mature_369_residues
TQFLQVHLLTFFPPSNMNRDDTGRPKTAMVGGAMRLRLSSQALKRAWRTSTIFSEALKGYMGERTQRLGEEILKALRAEG
VSEAQALAIARAVAGQFGKLNEDETPARIQQLAFISPDERKAAFDLARRYAAGEIPLPEKAKGKRGKANKVESEEEVEAP
EILLLRESDTAADIALFGRMLADKPAFNREAAAQVAHAITTHRISVDDDYYTAVDDLKRPSEDAGAGFIGETGFGSGVFY
TYMSINIDLLIRNLGGGDQARDLAATAIAALVEAAATTAPSGKQNSFAAHGRAGYILAERGKAQPRTLAGAFAKPVEGGD
IMDASIGRLEEFREAIDKAYGPTADATKVMRVGGEGSLADIIVFAREGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=364, Percent_Identity=30.7692307692308, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 39709; Mature: 39578

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFLQVHLLTFFPPSNMNRDDTGRPKTAMVGGAMRLRLSSQALKRAWRTSTIFSEALKG
CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMGERTQRLGEEILKALRAEGVSEAQALAIARAVAGQFGKLNEDETPARIQQLAFISPDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
RKAAFDLARRYAAGEIPLPEKAKGKRGKANKVESEEEVEAPEILLLRESDTAADIALFGR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHH
MLADKPAFNREAAAQVAHAITTHRISVDDDYYTAVDDLKRPSEDAGAGFIGETGFGSGVF
HHHCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE
YTYMSINIDLLIRNLGGGDQARDLAATAIAALVEAAATTAPSGKQNSFAAHGRAGYILAE
EEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEC
RGKAQPRTLAGAFAKPVEGGDIMDASIGRLEEFREAIDKAYGPTADATKVMRVGGEGSLA
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH
DIIVFAREGV
HEEEEECCCC
>Mature Secondary Structure 
TQFLQVHLLTFFPPSNMNRDDTGRPKTAMVGGAMRLRLSSQALKRAWRTSTIFSEALKG
CCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMGERTQRLGEEILKALRAEGVSEAQALAIARAVAGQFGKLNEDETPARIQQLAFISPDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
RKAAFDLARRYAAGEIPLPEKAKGKRGKANKVESEEEVEAPEILLLRESDTAADIALFGR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHH
MLADKPAFNREAAAQVAHAITTHRISVDDDYYTAVDDLKRPSEDAGAGFIGETGFGSGVF
HHHCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE
YTYMSINIDLLIRNLGGGDQARDLAATAIAALVEAAATTAPSGKQNSFAAHGRAGYILAE
EEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEC
RGKAQPRTLAGAFAKPVEGGDIMDASIGRLEEFREAIDKAYGPTADATKVMRVGGEGSLA
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH
DIIVFAREGV
HEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]