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The map label for this gene is ycjO [C]

Identifier: 148260654

GI number: 148260654

Start: 1827549

End: 1828547

Strand: Reverse

Name: ycjO [C]

Synonym: Acry_1657

Alternate gene names: 148260654

Gene position: 1828547-1827549 (Counterclockwise)

Preceding gene: 148260655

Following gene: 148260653

Centisome position: 53.95

GC content: 66.67

Gene sequence:

>999_bases
ATGCGCCCCGTCCGGCGGGGCGCATGCGACGCGGCGGCGCACGCTGCAAACGGGCAACGGATACCAATGGCAAACACGGA
CGGAACGGCAAGCCTCGCGGCCGCGAGCACGACGTTGAAGACGCCGCTGGCGCGGCGGCTGGAGCCGTGGTTCTTCGTCG
GGCCGTCGCTCTTCCTGCTGCTGCTCGTCGGCCTCTACCCGACGATCTTCGTGCTCTACTACTCGTTCCATAACTGGACG
ATGGGCATGGGCCCGCCGACCTTCGCCGGGCTCGAGAACTACATCAACGCGCTCACCTCCCCCGGCTTTCTCGACGCCCT
CAGGCGGACCGGCGAGTTCCTCATCGTCACCCTGCCGGTCGAGCTCGGCCTCGGCATGGCGATCGCGCTGGCGCTCGACC
AGACCCGGAACCCCGCGCTGCGCCGCCTCGTGCAGATCCTCCTCGTGGTGCCGATCGCGACCACGCCCAGCGTGGTCGGC
ATGCTCGTCCAGCTGATGTTCAACACCCAGCTCGGCATCGTGAACTATCTCGGCCATCGCCTCGGCCTCGGCCAGGTGGA
CTGGCTCGGCAGCGGCACCGCCGCGTTCGGCATGGTGACGGTGACGCAGATCTGGGAATGGACGCCCTTCGTCGCCCTCG
TGCTCTCGGCCAGTCTCGCCACCGTGCCCGGTGACATCGAGGAGGCGCTGATGCTGGAGACCGAAAGCTTCTGGGCCCGC
TTCCTGCACATCAAGCTGCCCTACATGCGGCCGGGCATCGTCGCCAGCCTCGTCTTCCAGACGATCTTCACGGTGAAGAC
CTTCGACATGATCTACTCGATCCAGAAGGGCGGCCCCGGCAACGCGACGCAGATGGTCTCGCTGAAGATCGAGCGCATCG
CCTTCCGCGGGTTCGATGTCGGGCTGGCCTCGGCGGAATCGGTGCTGACGCTCGTCTTCACCATCCTTCTCGCCCAGGCC
GTGGTGAAATTCCTCTATTCCGACCGGGCGGAGGGCTAG

Upstream 100 bases:

>100_bases
GGGCTGAAGCTGCTCAACGCCAAGCTCCAGCACTACATGAACTCGACGGGTTGCTGGAATTCGGTCAACCTGCCGAAGCG
CTGATCTTCCGGCGCGAACC

Downstream 100 bases:

>100_bases
CGATGAAACAGCGCGCCCTCACCCTGCTGCACGGACTGTTCCTGCTCGCCGTGGCGCTGGTGATCGTGTTTCCGTTCTAC
TGGATGATCGCCTCCTCGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRPVRRGACDAAAHAANGQRIPMANTDGTASLAAASTTLKTPLARRLEPWFFVGPSLFLLLLVGLYPTIFVLYYSFHNWT
MGMGPPTFAGLENYINALTSPGFLDALRRTGEFLIVTLPVELGLGMAIALALDQTRNPALRRLVQILLVVPIATTPSVVG
MLVQLMFNTQLGIVNYLGHRLGLGQVDWLGSGTAAFGMVTVTQIWEWTPFVALVLSASLATVPGDIEEALMLETESFWAR
FLHIKLPYMRPGIVASLVFQTIFTVKTFDMIYSIQKGGPGNATQMVSLKIERIAFRGFDVGLASAESVLTLVFTILLAQA
VVKFLYSDRAEG

Sequences:

>Translated_332_residues
MRPVRRGACDAAAHAANGQRIPMANTDGTASLAAASTTLKTPLARRLEPWFFVGPSLFLLLLVGLYPTIFVLYYSFHNWT
MGMGPPTFAGLENYINALTSPGFLDALRRTGEFLIVTLPVELGLGMAIALALDQTRNPALRRLVQILLVVPIATTPSVVG
MLVQLMFNTQLGIVNYLGHRLGLGQVDWLGSGTAAFGMVTVTQIWEWTPFVALVLSASLATVPGDIEEALMLETESFWAR
FLHIKLPYMRPGIVASLVFQTIFTVKTFDMIYSIQKGGPGNATQMVSLKIERIAFRGFDVGLASAESVLTLVFTILLAQA
VVKFLYSDRAEG
>Mature_332_residues
MRPVRRGACDAAAHAANGQRIPMANTDGTASLAAASTTLKTPLARRLEPWFFVGPSLFLLLLVGLYPTIFVLYYSFHNWT
MGMGPPTFAGLENYINALTSPGFLDALRRTGEFLIVTLPVELGLGMAIALALDQTRNPALRRLVQILLVVPIATTPSVVG
MLVQLMFNTQLGIVNYLGHRLGLGQVDWLGSGTAAFGMVTVTQIWEWTPFVALVLSASLATVPGDIEEALMLETESFWAR
FLHIKLPYMRPGIVASLVFQTIFTVKTFDMIYSIQKGGPGNATQMVSLKIERIAFRGFDVGLASAESVLTLVFTILLAQA
VVKFLYSDRAEG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=26.6949152542373, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=27.0547945205479, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36144; Mature: 36144

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVRRGACDAAAHAANGQRIPMANTDGTASLAAASTTLKTPLARRLEPWFFVGPSLFLL
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH
LLVGLYPTIFVLYYSFHNWTMGMGPPTFAGLENYINALTSPGFLDALRRTGEFLIVTLPV
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEH
ELGLGMAIALALDQTRNPALRRLVQILLVVPIATTPSVVGMLVQLMFNTQLGIVNYLGHR
HHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LGLGQVDWLGSGTAAFGMVTVTQIWEWTPFVALVLSASLATVPGDIEEALMLETESFWAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FLHIKLPYMRPGIVASLVFQTIFTVKTFDMIYSIQKGGPGNATQMVSLKIERIAFRGFDV
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCC
GLASAESVLTLVFTILLAQAVVKFLYSDRAEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPVRRGACDAAAHAANGQRIPMANTDGTASLAAASTTLKTPLARRLEPWFFVGPSLFLL
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHH
LLVGLYPTIFVLYYSFHNWTMGMGPPTFAGLENYINALTSPGFLDALRRTGEFLIVTLPV
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEH
ELGLGMAIALALDQTRNPALRRLVQILLVVPIATTPSVVGMLVQLMFNTQLGIVNYLGHR
HHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LGLGQVDWLGSGTAAFGMVTVTQIWEWTPFVALVLSASLATVPGDIEEALMLETESFWAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FLHIKLPYMRPGIVASLVFQTIFTVKTFDMIYSIQKGGPGNATQMVSLKIERIAFRGFDV
HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCC
GLASAESVLTLVFTILLAQAVVKFLYSDRAEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]