| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260578
Identifier: 148260578
GI number: 148260578
Start: 1743185
End: 1743907
Strand: Reverse
Name: 148260578
Synonym: Acry_1580
Alternate gene names: NA
Gene position: 1743907-1743185 (Counterclockwise)
Preceding gene: 148260585
Following gene: 148260577
Centisome position: 51.45
GC content: 74.41
Gene sequence:
>723_bases ATGTCCGCCACCATGCACATGACCGATGACGCGGGCACGCCGGAGCTCGTGGCGCTGCTGCGCGATTCGCGGCTGTTCCC GGGCCTCGACGAGGCGGCTTGCCGGCGACTCGCGGCCCCGGCGATGACGATGCTGGTCGCGCGGCGGACGCGGATTTTCG AGCAGGGCGAGATGCCGGGGGCGCAGGTGATCGTGAGCGGGGGCCGCGTGCACCTGACCGCCTCGGCCGGCGGGCGGGCG GAGATGCTGGTGGAGACGGTGCGGGCGCCGGACCTGCTGCTGCCGGCGGCGGTGCTGGAGGATTCGCCCTATCTGCTGCG CGCGGTGGCGGCGACGGAGTGCCGGCTGGTGCTGGTGCCGGCGGTGACGTTCCGCGCCGTGGCGGCGGCGGAGCCGGCGG TGGCGCAGGCGGTGATCGCCTGCCTCGCGCGGCAGTTCCGGCGGATGACGCGGCAGGTGAAGATGCTCAAGCTGCGGACG ACGACGCAGCGACTCGCCGCCTGGCTGCTGGCGCTGCGGCCGGCGGACGGGGGCGGGACGATCGAGCTGCCCTACGACAA GGGGATGATCGCCGCCGAACTCGGGATGACGCGGGAGAGCCTGTCGCGGGCCTTCGCGGCGCTGAGCGGCGAGGTGTTGA CGGTGGAGGGCGCGCGGGTGCGGGTGCGCGACTGGGCGGGGCTGGAGGCGGTCTGCCCGCGCGATCCGCTGATCGACGAT TGA
Upstream 100 bases:
>100_bases AAAGGGTCAATGGCGGATTTGATTTCGATCAAATAGATTGTTGATGGCATCCGAAACTCGGCGTAATCCGGCGAAACGAT CTACCGGAGGTTGCCTGAAG
Downstream 100 bases:
>100_bases ACGCGGCGCGGCGCCGAACGGGATAGGGGGATGGTGCCGCTCTCTCACGGCAGTCACCGAGTTGCCGACGACATTTTTCG GCGGCGGGCGCGGTCCCCGT
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSATMHMTDDAGTPELVALLRDSRLFPGLDEAACRRLAAPAMTMLVARRTRIFEQGEMPGAQVIVSGGRVHLTASAGGRA EMLVETVRAPDLLLPAAVLEDSPYLLRAVAATECRLVLVPAVTFRAVAAAEPAVAQAVIACLARQFRRMTRQVKMLKLRT TTQRLAAWLLALRPADGGGTIELPYDKGMIAAELGMTRESLSRAFAALSGEVLTVEGARVRVRDWAGLEAVCPRDPLIDD
Sequences:
>Translated_240_residues MSATMHMTDDAGTPELVALLRDSRLFPGLDEAACRRLAAPAMTMLVARRTRIFEQGEMPGAQVIVSGGRVHLTASAGGRA EMLVETVRAPDLLLPAAVLEDSPYLLRAVAATECRLVLVPAVTFRAVAAAEPAVAQAVIACLARQFRRMTRQVKMLKLRT TTQRLAAWLLALRPADGGGTIELPYDKGMIAAELGMTRESLSRAFAALSGEVLTVEGARVRVRDWAGLEAVCPRDPLIDD >Mature_239_residues SATMHMTDDAGTPELVALLRDSRLFPGLDEAACRRLAAPAMTMLVARRTRIFEQGEMPGAQVIVSGGRVHLTASAGGRAE MLVETVRAPDLLLPAAVLEDSPYLLRAVAATECRLVLVPAVTFRAVAAAEPAVAQAVIACLARQFRRMTRQVKMLKLRTT TQRLAAWLLALRPADGGGTIELPYDKGMIAAELGMTRESLSRAFAALSGEVLTVEGARVRVRDWAGLEAVCPRDPLIDD
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25788; Mature: 25656
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATMHMTDDAGTPELVALLRDSRLFPGLDEAACRRLAAPAMTMLVARRTRIFEQGEMPG CCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AQVIVSGGRVHLTASAGGRAEMLVETVRAPDLLLPAAVLEDSPYLLRAVAATECRLVLVP CEEEEECCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEEC AVTFRAVAAAEPAVAQAVIACLARQFRRMTRQVKMLKLRTTTQRLAAWLLALRPADGGGT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE IELPYDKGMIAAELGMTRESLSRAFAALSGEVLTVEGARVRVRDWAGLEAVCPRDPLIDD EEECCCCCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SATMHMTDDAGTPELVALLRDSRLFPGLDEAACRRLAAPAMTMLVARRTRIFEQGEMPG CCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AQVIVSGGRVHLTASAGGRAEMLVETVRAPDLLLPAAVLEDSPYLLRAVAATECRLVLVP CEEEEECCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEEC AVTFRAVAAAEPAVAQAVIACLARQFRRMTRQVKMLKLRTTTQRLAAWLLALRPADGGGT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE IELPYDKGMIAAELGMTRESLSRAFAALSGEVLTVEGARVRVRDWAGLEAVCPRDPLIDD EEECCCCCCCHHHHCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA