| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260538
Identifier: 148260538
GI number: 148260538
Start: 1700447
End: 1700839
Strand: Reverse
Name: 148260538
Synonym: Acry_1538
Alternate gene names: NA
Gene position: 1700839-1700447 (Counterclockwise)
Preceding gene: 148260546
Following gene: 148260533
Centisome position: 50.18
GC content: 64.38
Gene sequence:
>393_bases ATGACATTTTCGATTCGCGTGGCGGGGCTGCTGGTGGCGGCCGGGATTGCGGGCGGTGCCGTGGCGCAGGCGCAGTCGCT CGATGTTCCGCTGGCGACGCGCGACATGACGCAGATGCTCACCGCGATCGGGCATTCCAGCTACGCGGACTTCGTCGCGC CGGCGACGACGGTGTTCAAGGCGCATGTCGATCCCAAGAAATTCCCCGTTCAGGCGGCCGAGATCAATGCGAAGATCCCG CTCGGGCAGCCCTTCTCGGTGAAATACCTGACCACGCAGCGCGTCGGCCCGACGGTGGGTTACATCTTCGAGGTGACGCT GCATGACGGCGACCAGGTCCTCACCGACCTTACCCTGAACAACGGCAAGGTCGCGAGCTTCCACCTGCTCTGA
Upstream 100 bases:
>100_bases CCGGCGCAATTCGCCCGGCCCGCCGGAGCCGATGGCTTCGGCCGCGACCGGTGACGCCGGCGCGGAACAGGGCGGCTGAT ACCAAAAGAGAGGAAACCTC
Downstream 100 bases:
>100_bases GGCGCATCGCACCCGGCGGTCAGGCGCCGCCGGGTCGCCAGAGCGTGTCGGCCCGGCCTTCGTCGTTCAGCAGGCGGGCG AGGATGAACATCACGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTFSIRVAGLLVAAGIAGGAVAQAQSLDVPLATRDMTQMLTAIGHSSYADFVAPATTVFKAHVDPKKFPVQAAEINAKIP LGQPFSVKYLTTQRVGPTVGYIFEVTLHDGDQVLTDLTLNNGKVASFHLL
Sequences:
>Translated_130_residues MTFSIRVAGLLVAAGIAGGAVAQAQSLDVPLATRDMTQMLTAIGHSSYADFVAPATTVFKAHVDPKKFPVQAAEINAKIP LGQPFSVKYLTTQRVGPTVGYIFEVTLHDGDQVLTDLTLNNGKVASFHLL >Mature_129_residues TFSIRVAGLLVAAGIAGGAVAQAQSLDVPLATRDMTQMLTAIGHSSYADFVAPATTVFKAHVDPKKFPVQAAEINAKIPL GQPFSVKYLTTQRVGPTVGYIFEVTLHDGDQVLTDLTLNNGKVASFHLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13753; Mature: 13622
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSIRVAGLLVAAGIAGGAVAQAQSLDVPLATRDMTQMLTAIGHSSYADFVAPATTVFK CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCEEEEE AHVDPKKFPVQAAEINAKIPLGQPFSVKYLTTQRVGPTVGYIFEVTLHDGDQVLTDLTLN ECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEC NGKVASFHLL CCCEEEEEEC >Mature Secondary Structure TFSIRVAGLLVAAGIAGGAVAQAQSLDVPLATRDMTQMLTAIGHSSYADFVAPATTVFK EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCEEEEE AHVDPKKFPVQAAEINAKIPLGQPFSVKYLTTQRVGPTVGYIFEVTLHDGDQVLTDLTLN ECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEC NGKVASFHLL CCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA