| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is mii [H]
Identifier: 148260269
GI number: 148260269
Start: 1412161
End: 1413315
Strand: Reverse
Name: mii [H]
Synonym: Acry_1266
Alternate gene names: 148260269
Gene position: 1413315-1412161 (Counterclockwise)
Preceding gene: 148260270
Following gene: 148260266
Centisome position: 41.7
GC content: 73.33
Gene sequence:
>1155_bases GTGGCGCTCCGGGCAATCCGCGCCGTGTTCATGCGCGGCGGCACCTCGAAGGCGCTGATCTTCCGCGCCGGCGATCTCCC CGCCGATCGGGCGGACTGGGCGCCGATCTTCCTCGCCGCGATGGGCTCGCCGGACCCGGCGATGCGCCAGCTCGACGGCA TGGGCGGCGGCGTGTCCTCGCTGTCGAAATGCTGCGTCGTCGGCCCGCCGAGCCGGCCGGATGCGGATGTCGACTACACG TTCGCGCAGGTCGCGATCGACCGGCCGGAGGTCGATTACGCCAGTAATTGCGGCAACATGTCCTCGGCGATCGGCCCCTT CGCGGTGGATGAGGGGCTGGTCGCCCCGCCTGCGGGGAACGAGGCGGTGGTGCGCATCCACAACACCAATACCGGCAAGA TCATCGTCGCCCGGTTCCCGATGGAAGATGGCCGCGCCGCGGTGACGGGTGACCTCGCGATCGACGGCGTCGCCGGCACC GGGGCACCGATCCGCCTCGATTTCACCGATCCCGGCGGGGCCGGCACCGGGCGCCTGCTGCCGACCGGCAACCTGACGGA CCGGCTCGACGTACCCGGCCTCGGGCCGCTGCGCGTCACCCTGATCGACGCCGCCAATCCCTGCGTGCTGGTCGCCGCCG CCGATCTCGGGATGACCGCGACCGAAACGCCGGCGGCGATGGAGCGCGACACCGCGCTGATCGCCGGGATCGAGGCGCTG CGGCGCGCGGCTTCGGTGCGGATGGGCCTGGCCGCCGATCTCGAGGCGGCGGCGCGGATCATCAGCGTGCCGAAAGTGGG CATTCTCGCGCCGCCGGCGGATGCGCCCGTCCTGTCAGGGGCGGTGCAGACGGCCGCGAGCGTCGACATTCTGGCGCGCA TGATGTCGTCCGGCCAGCCGCATCGCGCGGTGCCGCTGACCGGCGCGCTCTGCCTCGCCGTGGCCTGCCGGCTGCCCGGC ACCGTGGCGCATGACCTGGTCCGGCCGGGCGAGGCGACCGATCCGGTGCGGGTCGGCCATCCTTCCGGCGCGATCCTCGT CGCCGCCGGCGTGTCCTCAGGGCCGGACGGACCCCGCGTCTCGCACGCCACCGTGTTCCGGACCGCGCGGCGGCTGTTCC AGGGCGAGGTGCTCCATGTCGGCCCCCGCGTATAG
Upstream 100 bases:
>100_bases GCGATGCGCGCGCATGTCGAGAACGGCTATCGCCGGCTGACCGGCCAGGCGCTGGTCCCGGGTCCGGCATCCGCCGCGCC GGCGGCGTCGGGCTGATCCG
Downstream 100 bases:
>100_bases GGGTTACGCTACCGGCTTGTCGGGGAAGGCGAGTTCGTGGCGCGAGCGCCAGTCCGGTGTCACGTAGTTCACGATCAGCG AGCGCCGCACCCCGCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: (R)-3-methylitaconate isomerase; 3-methylitaconate delta-isomerase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MALRAIRAVFMRGGTSKALIFRAGDLPADRADWAPIFLAAMGSPDPAMRQLDGMGGGVSSLSKCCVVGPPSRPDADVDYT FAQVAIDRPEVDYASNCGNMSSAIGPFAVDEGLVAPPAGNEAVVRIHNTNTGKIIVARFPMEDGRAAVTGDLAIDGVAGT GAPIRLDFTDPGGAGTGRLLPTGNLTDRLDVPGLGPLRVTLIDAANPCVLVAAADLGMTATETPAAMERDTALIAGIEAL RRAASVRMGLAADLEAAARIISVPKVGILAPPADAPVLSGAVQTAASVDILARMMSSGQPHRAVPLTGALCLAVACRLPG TVAHDLVRPGEATDPVRVGHPSGAILVAAGVSSGPDGPRVSHATVFRTARRLFQGEVLHVGPRV
Sequences:
>Translated_384_residues MALRAIRAVFMRGGTSKALIFRAGDLPADRADWAPIFLAAMGSPDPAMRQLDGMGGGVSSLSKCCVVGPPSRPDADVDYT FAQVAIDRPEVDYASNCGNMSSAIGPFAVDEGLVAPPAGNEAVVRIHNTNTGKIIVARFPMEDGRAAVTGDLAIDGVAGT GAPIRLDFTDPGGAGTGRLLPTGNLTDRLDVPGLGPLRVTLIDAANPCVLVAAADLGMTATETPAAMERDTALIAGIEAL RRAASVRMGLAADLEAAARIISVPKVGILAPPADAPVLSGAVQTAASVDILARMMSSGQPHRAVPLTGALCLAVACRLPG TVAHDLVRPGEATDPVRVGHPSGAILVAAGVSSGPDGPRVSHATVFRTARRLFQGEVLHVGPRV >Mature_383_residues ALRAIRAVFMRGGTSKALIFRAGDLPADRADWAPIFLAAMGSPDPAMRQLDGMGGGVSSLSKCCVVGPPSRPDADVDYTF AQVAIDRPEVDYASNCGNMSSAIGPFAVDEGLVAPPAGNEAVVRIHNTNTGKIIVARFPMEDGRAAVTGDLAIDGVAGTG APIRLDFTDPGGAGTGRLLPTGNLTDRLDVPGLGPLRVTLIDAANPCVLVAAADLGMTATETPAAMERDTALIAGIEALR RAASVRMGLAADLEAAARIISVPKVGILAPPADAPVLSGAVQTAASVDILARMMSSGQPHRAVPLTGALCLAVACRLPGT VAHDLVRPGEATDPVRVGHPSGAILVAAGVSSGPDGPRVSHATVFRTARRLFQGEVLHVGPRV
Specific function: Catalyzes the reversible isomerization of (R)-3- methylitaconate to 2,3-dimethylmaleate. Has very low isomerase activity with itaconate [H]
COG id: COG2828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786985, Length=377, Percent_Identity=37.9310344827586, Blast_Score=207, Evalue=8e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007400 [H]
Pfam domain/function: PF04303 PrpF [H]
EC number: =5.3.3.6 [H]
Molecular weight: Translated: 39106; Mature: 38975
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRAIRAVFMRGGTSKALIFRAGDLPADRADWAPIFLAAMGSPDPAMRQLDGMGGGVSS CHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHH LSKCCVVGPPSRPDADVDYTFAQVAIDRPEVDYASNCGNMSSAIGPFAVDEGLVAPPAGN HCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCHHCCCCEECCCCEECCCCCC EAVVRIHNTNTGKIIVARFPMEDGRAAVTGDLAIDGVAGTGAPIRLDFTDPGGAGTGRLL CEEEEEEECCCCEEEEEECCCCCCCEEEEECEEEECCCCCCCEEEEEECCCCCCCCCCEE PTGNLTDRLDVPGLGPLRVTLIDAANPCVLVAAADLGMTATETPAAMERDTALIAGIEAL ECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RRAASVRMGLAADLEAAARIISVPKVGILAPPADAPVLSGAVQTAASVDILARMMSSGQP HHHHHHHHCHHHCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC HRAVPLTGALCLAVACRLPGTVAHDLVRPGEATDPVRVGHPSGAILVAAGVSSGPDGPRV CCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCC SHATVFRTARRLFQGEVLHVGPRV CHHHHHHHHHHHHCCCEEECCCCC >Mature Secondary Structure ALRAIRAVFMRGGTSKALIFRAGDLPADRADWAPIFLAAMGSPDPAMRQLDGMGGGVSS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHH LSKCCVVGPPSRPDADVDYTFAQVAIDRPEVDYASNCGNMSSAIGPFAVDEGLVAPPAGN HCCEEEECCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCHHCCCCEECCCCEECCCCCC EAVVRIHNTNTGKIIVARFPMEDGRAAVTGDLAIDGVAGTGAPIRLDFTDPGGAGTGRLL CEEEEEEECCCCEEEEEECCCCCCCEEEEECEEEECCCCCCCEEEEEECCCCCCCCCCEE PTGNLTDRLDVPGLGPLRVTLIDAANPCVLVAAADLGMTATETPAAMERDTALIAGIEAL ECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RRAASVRMGLAADLEAAARIISVPKVGILAPPADAPVLSGAVQTAASVDILARMMSSGQP HHHHHHHHCHHHCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC HRAVPLTGALCLAVACRLPGTVAHDLVRPGEATDPVRVGHPSGAILVAAGVSSGPDGPRV CCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCC SHATVFRTARRLFQGEVLHVGPRV CHHHHHHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA